Basic Information:

  VIRBase ID:  

VHID00167254

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H7-5p:  MIMAT0014351          CDON:  NM_016952     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H7-5p	CDON
miRBase Accession/Entrez ID	MIMAT0014351	50937
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CDO//CDON1//HPE11//ORCAM

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CDON	chr11:125835970(-) A-I      intronic chr11:125840234(-) A-I      intronic chr11:125843902(-) A-I      intronic chr11:125835972(-) A-I      intronic chr11:125835969(-) A-I      intronic chr11:125843962(-) A-I      intronic chr11:125840185(-) A-I      intronic chr11:125918095(-) A-I      intronic chr11:125843305(-) A-I      intronic chr11:125843165(-) A-I      intronic chr11:125918164(-) A-I      intronic chr11:125843955(-) A-I      intronic chr11:125834898(-) A-I      intronic chr11:125854492(-) A-I      intronic chr11:125835773(-) A-I      intronic chr11:125840324(-) A-I      intronic chr11:125843183(-) A-I      intronic chr11:125842201(-) A-I      intronic chr11:125843928(-) A-I      intronic chr11:125843876(-) A-I      intronic chr11:125835099(-) A-I      intronic chr11:125843400(-) A-I      intronic chr11:125840274(-) A-I      intronic chr11:125907166(-) A-I      intronic chr11:125843364(-) A-I      intronic chr11:125843363(-) A-I      intronic chr11:125917937(-) A-I      intronic chr11:125835098(-) A-I      intronic chr11:125843343(-) A-I      intronic chr11:125858356(-) A-I      intronic chr11:125855250(-) A-I      intronic chr11:125835864(-) A-I      intronic chr11:125834912(-) A-I      intronic chr11:125843278(-) A-I      intronic chr11:125855146(-) A-I      intronic chr11:125843964(-) A-I      intronic chr11:125843228(-) A-I      intronic chr11:125840230(-) A-I      intronic chr11:125858360(-) A-I      intronic chr11:125843184(-) A-I      intronic chr11:125837782(-) A-I      intronic chr11:125842276(-) A-I      intronic chr11:125844072(-) A-I      intronic chr11:125842240(-) A-I      intronic chr11:125840208(-) A-I      intronic chr11:125830179(-) A-I      3'UTR chr11:125835988(-) A-I      intronic chr11:125840340(-) A-I      intronic chr11:125912764(-) A-I      intronic chr11:125835867(-) A-I      intronic chr11:125871168(-) A-I      intronic chr11:125855249(-) A-I      intronic chr11:125843215(-) A-I      intronic chr11:125835825(-) A-I      intronic chr11:125837608(-) A-I      intronic chr11:125835993(-) A-I      intronic chr11:125907165(-) A-I      intronic chr11:125882448(-) A-I      intronic chr11:125837783(-) A-I      intronic chr11:125842308(-) A-I      intronic chr11:125855248(-) A-I      intronic chr11:125837765(-) A-I      intronic chr11:125840252(-) A-I      intronic chr11:125843893(-) A-I      intronic chr11:125835847(-) A-I      intronic chr11:125907211(-) A-I      intronic chr11:125852048(-) A-I      intronic chr11:125843863(-) A-I      intronic chr11:125842211(-) A-I      intronic chr11:125907164(-) A-I      intronic chr11:125840314(-) A-I      intronic chr11:125843171(-) A-I      intronic chr11:125855370(-) A-I      intronic chr11:125843238(-) A-I      intronic chr11:125834986(-) A-I      intronic chr11:125894931(-) A-I      intronic chr11:125837835(-) A-I      intronic chr11:125837841(-) A-I      intronic chr11:125837836(-) A-I      intronic chr11:125837648(-) A-I      intronic chr11:125855239(-) A-I      intronic chr11:125918854(-) A-I      intronic chr11:125840207(-) A-I      intronic chr11:125842174(-) A-I      intronic chr11:125837815(-) A-I      intronic chr11:125835785(-) A-I      intronic chr11:125837849(-) A-I      intronic chr11:125835053(-) A-I      intronic chr11:125835078(-) A-I      intronic chr11:125840135(-) A-I      intronic chr11:125837876(-) A-I      intronic chr11:125844063(-) A-I      intronic chr11:125852047(-) A-I      intronic chr11:125835019(-) A-I      intronic chr11:125918102(-) A-I      intronic chr11:125915085(-) A-I      intronic chr11:125921628(-) A-I      intronic chr11:125843246(-) A-I      intronic chr11:125843412(-) A-I      intronic chr11:125837781(-) A-I      intronic chr11:125843858(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CDON	chr11:125827429-125827430(-) m6A 3'UTR       27773535 chr11:125828597-125828598(-) m6A 3'UTR       24981863 chr11:125828612-125828613(-) m6A 3'UTR       24981863 chr11:125829330-125829331(-) m6A 3'UTR       24981863 chr11:125829370-125829371(-) m6A 3'UTR       24981863 chr11:125829856-125829857(-) m6A 3'UTR       27773535//22608085 chr11:125829871-125829872(-) m6A 3'UTR       27773535//22608085 chr11:125830045-125830046(-) m6A 3'UTR       24284625//24981863//27773535//22608085 chr11:125830091-125830092(-) m6A 3'UTR       22608085 chr11:125830102-125830103(-) m6A 3'UTR       22608085 chr11:125830755-125830756(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr11:125830767-125830768(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr11:125830825-125830826(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr11:125830833-125830834(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr11:125830841-125830842(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr11:125830876-125830877(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr11:125830907-125830908(-) m6A CDS       24284625//25456834//24981863//22608085 chr11:125830976-125830977(-) m6A CDS       25456834//22608085 chr11:125830996-125830997(-) m6A CDS       25456834//22608085 chr11:125850964-125850965(-) m6A CDS       - chr11:125850981-125850982(-) m6A CDS       - chr11:125864822-125864823(-) m6A CDS       27773535 chr11:125875729-125875730(-) m6A 3'UTR//CDS       - chr11:125875742-125875743(-) m6A 3'UTR//CDS       - chr11:125875862-125875863(-) m6A 3'UTR//CDS       24284625 chr11:125880766-125880767(-) m6A 3'UTR//intron       22608085 chr11:125885104-125885105(-) m6A exon//intron       24981863//22608085 chr11:125885151-125885152(-) m6A CDS//exon       24981863//22608085 chr11:125885241-125885242(-) m6A CDS//exon       24284625//24981863//27371828//22608085 chr11:125885320-125885321(-) m6A CDS//exon       22608085 chr11:125889523-125889524(-) m6A CDS//exon       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H7-5p	Exosome K562 cells     24460325
	CDON	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Membrane HCC cell line (HepG2)     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H7-5p
Interactor2: CDON

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg