Basic Information:

  VIRBase ID:  

VHID00166901

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H7-5p:  MIMAT0014351          IGF2BP1:  NM_001160423     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H7-5p	IGF2BP1
miRBase Accession/Entrez ID	MIMAT0014351	10642
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CRD-BP//CRDBP//IMP-1//IMP1//VICKZ1//ZBP1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	IGF2BP1	chr17:47118355(+) A-I      intronic chr17:47117779(+) A-I      intronic chr17:47110258(+) A-I      intronic chr17:47117784(+) A-I      intronic chr17:47106722(+) A-I      intronic chr17:47118359(+) A-I      intronic chr17:47106308(+) A-I      intronic chr17:47097723(+) A-I      intronic chr17:47104218(+) A-I      intronic chr17:47104235(+) A-I      intronic chr17:47104289(+) A-I      intronic chr17:47106298(+) A-I      intronic chr17:47111829(+) A-I      intronic chr17:47087387(+) A-I      intronic chr17:47117711(+) A-I      intronic chr17:47117714(+) A-I      intronic chr17:47104169(+) A-I      intronic chr17:47117707(+) A-I      intronic chr17:47107038(+) A-I      intronic chr17:47104302(+) A-I      intronic chr17:47101691(+) A-I      intronic chr17:47118390(+) A-I      intronic chr17:47104170(+) A-I      intronic chr17:47105432(+) A-I      intronic chr17:47111990(+) A-I      intronic chr17:47117678(+) A-I      intronic chr17:47131106(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	IGF2BP1	chr17:47114560(+) A-I intron -    22327324 chr17:47114580(+) A-I intron -    22327324

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	IGF2BP1	chr17:47074840-47074841(+) m6A 5'UTR       24284625//25456834//24981863//22608085 chr17:47074852-47074853(+) m1A 5'UTR//exon       26863196//26863410 chr17:47074914-47074915(+) m6A 5'UTR//exon       24284625//25456834//24981863//27773536//22575960//22608085 chr17:47074969-47074970(+) m6A 5'UTR//exon       24284625//25456834//24981863//27773536//22575960//22608085 chr17:47075080-47075081(+) m6A 5'UTR//exon       24284625 chr17:47075098-47075099(+) m6A 5'UTR//exon       24284625 chr17:47075234-47075235(+) m6A CDS//exon       24284625//24981863 chr17:47075272-47075273(+) m6A CDS//exon       24284625//24981863//26404942 chr17:47076507-47076508(+) m6A CDS//exon       24284625//24981863 chr17:47076525-47076526(+) m6A CDS//exon       24284625//24981863 chr17:47081981-47081982(+) m6A exon//intron       24981863 chr17:47114220-47114221(+) m6A exon//intron       24981863 chr17:47114288-47114289(+) m6A exon//intron       24981863 chr17:47114575-47114576(+) m6A intron       24981863//22608085 chr17:47114607-47114608(+) m6A intron       24981863//22608085 chr17:47114615-47114616(+) m6A intron       24981863//22608085 chr17:47114745-47114746(+) m6A intron       24981863//22608085 chr17:47114777-47114778(+) m6A intron       24981863//22608085 chr17:47115564-47115565(+) m6A CDS//exon//intron       24981863 chr17:47115796-47115797(+) m6A CDS//exon//intron       24981863 chr17:47117443-47117444(+) m6A CDS//intron       24981863 chr17:47118813-47118814(+) m6A CDS       24981863 chr17:47118842-47118843(+) m6A CDS       24981863 chr17:47119611-47119612(+) m6A CDS       24981863 chr17:47119637-47119638(+) m6A CDS       24981863 chr17:47120829-47120830(+) Y CDS       26075521 chr17:47123670-47123671(+) m6A CDS       26404942 chr17:47123675-47123676(+) m6A CDS       26404942 chr17:47123716-47123717(+) m6A CDS       26404942 chr17:47126735-47126736(+) m6A CDS       26404942 chr17:47126772-47126773(+) m6A CDS       26404942 chr17:47126836-47126837(+) m6A 3'UTR       26404942 chr17:47126902-47126903(+) m6A 3'UTR       26404942 chr17:47126965-47126966(+) m6A 3'UTR       25456834//26404942 chr17:47126986-47126987(+) m6A 3'UTR       26404942 chr17:47128281-47128282(+) m6A 3'UTR       - chr17:47128388-47128389(+) m6A 3'UTR       - chr17:47128436-47128437(+) m6A 3'UTR       - chr17:47129423-47129424(+) m6A 3'UTR       - chr17:47129455-47129456(+) m6A 3'UTR       - chr17:47129914-47129915(+) Y 3'UTR       26075521 chr17:47130997-47130998(+) Y 3'UTR       26075521 chr17:47131484-47131485(+) m6A 3'UTR       - chr17:47131756-47131757(+) m6A 3'UTR       26404942 chr17:47131769-47131770(+) m6A 3'UTR       26404942

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H7-5p	Exosome K562 cells     24460325
	IGF2BP1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)|K562 cells     - Membrane HCC cell line (HepG2)|K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H7-5p
Interactor2: IGF2BP1

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg