Basic Information:

  VIRBase ID:  

VHID00165584

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H2:  MIMAT0010205          CRB2:  NR_104603     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H2	CRB2
miRBase Accession/Entrez ID	MIMAT0010205	286204
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FSGS9//VMCKD

RNA Editing:

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	CRB2	chr9:126132620(+) A-I exon CDS    19478186

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CRB2	chr9:126132445-126132446(+) m6A CDS       25456834 chr9:126132490-126132491(+) m6A CDS       24284625//25456834 chr9:126132627-126132628(+) m6A CDS       24284625//25456834 chr9:126132748-126132749(+) m6A CDS       25456834 chr9:126132855-126132856(+) m6A CDS       24284625//25456834//24981863 chr9:126132863-126132864(+) m6A CDS       24284625//25456834//24981863 chr9:126133204-126133205(+) m6A CDS       - chr9:126133639-126133640(+) m6A CDS       25456834 chr9:126133819-126133820(+) m6A CDS       - chr9:126133846-126133847(+) m6A CDS       - chr9:126134479-126134480(+) m6A CDS       - chr9:126136374-126136375(+) m6A 3'UTR//intron       - chr9:126139300-126139301(+) m6A CDS       24284625//25456834 chr9:126139331-126139332(+) m6A CDS       24284625//25456834 chr9:126139397-126139398(+) m6A 3'UTR       24284625//25456834 chr9:126139426-126139427(+) m6A 3'UTR       24284625//25456834 chr9:126139517-126139518(+) m6A 3'UTR       25456834 chr9:126139540-126139541(+) m6A 3'UTR       25456834 chr9:126140237-126140238(+) m6A 3'UTR//intron       24284625//25456834 chr9:126140294-126140295(+) m6A 3'UTR//intron       24284625//25456834 chr9:126140397-126140398(+) m6A 3'UTR//intron       24284625//25456834//24981863 chr9:126140410-126140411(+) m6A 3'UTR//intron       24284625//25456834//24981863 chr9:126140459-126140460(+) m6A 3'UTR//intron       25456834//24981863 chr9:126140514-126140515(+) m6A 3'UTR//intron       25456834 chr9:126140622-126140623(+) m6A 3'UTR//intron       25456834 chr9:126140776-126140777(+) m6A 3'UTR//intron       25456834 chr9:126140782-126140783(+) m6A 3'UTR//intron       25456834 chr9:126140789-126140790(+) m6A 3'UTR//intron       25456834 chr9:126140829-126140830(+) m6A 3'UTR//intron       25456834 chr9:126140876-126140877(+) m6A 3'UTR//intron       25456834 chr9:126140891-126140892(+) m6A 3'UTR//intron       25456834 chr9:126142592-126142593(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CRB2	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H2
Interactor2: CRB2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg