Detail Information

Basic Information:


  VIRBase ID:  

VHID00165331

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H2:           PHOSPHO1:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H2 PHOSPHO1
miRBase
Accession/Entrez ID
MIMAT0010205 162466
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PHOSPHO1
chr17:47300816-47300817(-) m6A 3'UTR       24284625
chr17:47300877-47300878(-) m6A 3'UTR       24284625//25456834
chr17:47300884-47300885(-) m6A 3'UTR       24284625//25456834
chr17:47300951-47300952(-) m6A 3'UTR       24284625//25456834
chr17:47301005-47301006(-) m6A 3'UTR       24284625//24209618
chr17:47301165-47301166(-) m6A 3'UTR       24284625
chr17:47301198-47301199(-) m6A 3'UTR       24981863
chr17:47301343-47301344(-) m6A 3'UTR       24209618
chr17:47301538-47301539(-) m6A 3'UTR       25456834//24981863
chr17:47301943-47301944(-) m6A CDS       27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate PHOSPHO1
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H2
Interactor2: PHOSPHO1

Evidence Support:


Prediction-Evidence miRanda//Rep//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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