Basic Information:

  VIRBase ID:  

VHID00165092

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H2:  MIMAT0010205          WDR88:  NR_135565     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H2	WDR88
miRBase Accession/Entrez ID	MIMAT0010205	126248
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	PQWD

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	WDR88	chr19:33623804(+) A-I      intronic chr19:33623816(+) A-I      intronic chr19:33666021(+) A-I      intronic chr19:33624334(+) A-I      intronic chr19:33624245(+) A-I      intronic chr19:33623793(+) A-I      intronic chr19:33666047(+) A-I      intronic chr19:33623811(+) A-I      intronic chr19:33656749(+) A-I      intronic chr19:33637167(+) A-I      intronic chr19:33623958(+) A-I      intronic chr19:33623936(+) A-I      intronic chr19:33624064(+) A-I      intronic chr19:33623810(+) A-I      intronic chr19:33650055(+) A-I      intronic chr19:33653751(+) A-I      intronic chr19:33664778(+) A-I      intronic chr19:33623970(+) A-I      intronic chr19:33650138(+) A-I      intronic chr19:33633697(+) A-I      intronic chr19:33637066(+) A-I      intronic chr19:33653694(+) A-I      intronic chr19:33637083(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	WDR88	chr19:33662715(+) A-I intron -    22327324 chr19:33662943(+) A-I intron -    22327324 chr19:33661977(+) T-C intron -    22484847 chr19:33662016(+) T-C intron -    22484847 chr19:33662171(+) T-C intron -    22484847 chr19:33662709(+) T-C intron -    22484847 chr19:33662715(+) T-C intron -    22484847 chr19:33662808(+) T-C intron -    22484847 chr19:33662818(+) T-C intron -    22484847 chr19:33662872(+) T-C intron -    22484847 chr19:33662873(+) T-C intron -    22484847 chr19:33662943(+) T-C intron -    22484847 chr19:33663750(+) T-C intron -    22484847 chr19:33663752(+) T-C intron -    22484847 chr19:33663779(+) T-C intron -    22484847 chr19:33663791(+) T-C intron -    22484847 chr19:33663824(+) T-C intron -    22484847 chr19:33663849(+) T-C intron -    22484847 chr19:33665031(+) T-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	WDR88	chr19:33663259-33663260(+) m6A CDS       27773535 chr19:33666443-33666444(+) m6A 3'UTR//CDS       24284625//24209618//27371828//22608085 chr19:33666588-33666589(+) m6A 3'UTR       25456834//22608085 chr19:33666599-33666600(+) m6A 3'UTR       25456834//22608085 chr19:33666616-33666617(+) m6A 3'UTR       25456834//22608085 chr19:33666660-33666661(+) m6A 3'UTR       25456834//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	WDR88	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H2
Interactor2: WDR88

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg