Detail Information

Basic Information:


  VIRBase ID:  

VHID00163345

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H2:           OIP5:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H2 OIP5
miRBase
Accession/Entrez ID		 MIMAT0010205 11339
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - 5730547N13Rik//CT86//hMIS18beta//LINT-25//MIS18B//MIS18beta

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR OIP5
chr15:41622500(-) A-I      intronic
chr15:41622499(-) A-I      intronic
chr15:41622498(-) A-I      intronic
chr15:41622491(-) A-I      intronic
chr15:41611602(-) A-I      intronic
chr15:41605065(-) A-I      intronic
chr15:41622473(-) A-I      intronic
chr15:41608392(-) A-I      intronic
chr15:41602728(-) A-I      intronic
chr15:41611381(-) A-I      intronic
chr15:41609742(-) A-I      intronic
chr15:41608744(-) A-I      intronic
chr15:41607023(-) A-I      intronic
chr15:41622529(-) A-I      intronic
chr15:41622539(-) A-I      intronic
chr15:41622018(-) A-I      intronic
chr15:41602568(-) A-I      intronic
chr15:41615517(-) A-I      intronic
chr15:41611120(-) A-I      intronic
chr15:41615515(-) A-I      intronic
chr15:41618329(-) A-I      intronic
chr15:41623777(-) A-I      intronic
chr15:41622785(-) A-I      intronic
chr15:41623731(-) A-I      intronic
chr15:41619576(-) A-I      intronic
chr15:41615429(-) A-I      intronic
chr15:41611447(-) A-I      intronic
chr15:41603548(-) A-I      intronic
chr15:41621090(-) A-I      intronic
chr15:41621787(-) A-I      intronic
chr15:41621152(-) A-I      intronic
chr15:41615444(-) A-I      intronic
chr15:41614733(-) A-I      intronic
chr15:41602793(-) A-I      intronic
chr15:41603603(-) A-I      intronic
chr15:41619806(-) A-I      intronic
chr15:41619472(-) A-I      intronic
chr15:41607163(-) A-I      intronic
chr15:41611711(-) A-I      intronic
chr15:41619548(-) A-I      intronic
chr15:41621718(-) A-I      intronic
chr15:41609980(-) A-I      intronic
chr15:41607459(-) A-I      intronic
chr15:41617966(-) A-I      intronic
chr15:41603993(-) A-I      intronic
chr15:41619517(-) A-I      intronic
chr15:41618714(-) A-I      intronic
chr15:41618273(-) A-I      intronic
chr15:41603549(-) A-I      intronic
chr15:41605027(-) A-I      intronic
chr15:41618251(-) A-I      intronic
chr15:41602783(-) A-I      intronic
chr15:41618277(-) A-I      intronic
chr15:41607519(-) A-I      intronic
chr15:41616826(-) A-I      intronic
chr15:41608387(-) A-I      intronic
chr15:41621715(-) A-I      intronic
chr15:41620416(-) A-I      intronic
chr15:41617882(-) A-I      intronic
chr15:41616474(-) A-I      intronic
chr15:41607155(-) A-I      intronic
chr15:41622036(-) A-I      intronic
chr15:41623723(-) A-I      intronic
chr15:41616894(-) A-I      intronic
chr15:41622479(-) A-I      intronic
chr15:41602590(-) A-I      intronic
chr15:41607188(-) A-I      intronic
chr15:41622081(-) A-I      intronic
chr15:41610488(-) A-I      intronic
chr15:41603349(-) A-I      intronic
chr15:41616375(-) A-I      intronic
chr15:41623701(-) A-I      intronic
chr15:41623700(-) A-I      intronic
chr15:41604020(-) A-I      intronic
chr15:41618274(-) A-I      intronic
chr15:41609955(-) A-I      intronic
chr15:41602225(-) A-I      intronic
chr15:41617481(-) A-I      intronic
chr15:41603940(-) A-I      intronic
chr15:41602093(-) A-I      intronic
chr15:41610563(-) A-I      intronic
chr15:41604190(-) A-I      intronic
chr15:41611033(-) A-I      intronic
chr15:41614759(-) A-I      intronic
chr15:41621678(-) A-I      intronic
chr15:41603422(-) A-I      intronic
chr15:41605082(-) A-I      intronic
chr15:41610702(-) A-I      intronic
chr15:41602189(-) A-I      intronic
chr15:41608136(-) A-I      intronic
chr15:41623687(-) A-I      intronic
chr15:41602745(-) A-I      intronic
chr15:41607516(-) A-I      intronic
chr15:41607551(-) A-I      intronic
chr15:41603604(-) A-I      intronic
chr15:41611591(-) A-I      intronic
chr15:41615888(-) A-I      intronic
chr15:41618695(-) A-I      intronic
chr15:41616891(-) A-I      intronic
chr15:41609993(-) A-I      intronic
chr15:41619452(-) A-I      intronic
chr15:41621791(-) A-I      intronic
chr15:41607600(-) A-I      intronic
chr15:41618790(-) A-I      intronic
chr15:41609581(-) A-I      intronic
chr15:41618903(-) A-I      intronic
chr15:41609783(-) A-I      intronic
chr15:41617965(-) A-I      intronic
chr15:41621763(-) A-I      intronic
chr15:41616890(-) A-I      intronic
chr15:41621707(-) A-I      intronic
chr15:41618786(-) A-I      intronic
chr15:41608161(-) A-I      intronic
chr15:41618724(-) A-I      intronic
chr15:41607564(-) A-I      intronic
chr15:41614717(-) A-I      intronic
chr15:41603932(-) A-I      intronic
chr15:41611592(-) A-I      intronic
chr15:41609864(-) A-I      intronic
chr15:41618828(-) A-I      intronic
chr15:41622105(-) A-I      intronic
chr15:41602635(-) A-I      intronic
chr15:41622385(-) A-I      intronic
chr15:41621599(-) A-I      intronic
chr15:41616852(-) A-I      intronic
chr15:41610525(-) A-I      intronic
chr15:41606783(-) A-I      intronic
chr15:41620134(-) A-I      intronic
chr15:41623775(-) A-I      intronic
chr15:41620183(-) A-I      intronic
chr15:41617413(-) A-I      intronic
chr15:41615868(-) A-I      intronic
chr15:41603354(-) A-I      intronic
chr15:41623721(-) A-I      intronic
chr15:41620273(-) A-I      intronic
chr15:41602764(-) A-I      intronic
chr15:41614916(-) A-I      intronic
chr15:41602246(-) A-I      intronic
chr15:41605055(-) A-I      intronic
chr15:41621169(-) A-I      intronic
chr15:41607520(-) A-I      intronic
chr15:41618785(-) A-I      intronic
chr15:41621076(-) A-I      intronic
chr15:41604225(-) A-I      intronic
chr15:41610971(-) A-I      intronic
chr15:41604586(-) A-I      intronic
chr15:41604364(-) A-I      intronic
chr15:41606967(-) A-I      intronic
chr15:41603912(-) A-I      intronic
chr15:41622435(-) A-I      intronic
chr15:41606968(-) A-I      intronic
chr15:41614651(-) A-I      intronic
chr15:41603435(-) A-I      intronic
chr15:41602716(-) A-I      intronic
chr15:41607575(-) A-I      intronic
chr15:41614415(-) A-I      intronic
chr15:41610086(-) A-I      intronic
chr15:41615021(-) A-I      intronic
chr15:41611336(-) A-I      intronic
chr15:41610005(-) A-I      intronic
chr15:41610528(-) A-I      intronic
chr15:41621093(-) A-I      intronic
chr15:41610649(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED OIP5
chr15:41610010(-) A-I intron -    22327324
chr15:41602707(-) T-C intron -    22484847
chr15:41603606(-) C-T intron -    22484847
chr15:41603924(-) T-C intron -    22484847
chr15:41607516(-) A-G intron -    22484847
chr15:41607519(-) A-G intron -    22484847
chr15:41607533(-) T-C intron -    22484847
chr15:41607542(-) T-C intron -    22484847
chr15:41607569(-) T-C intron -    22484847
chr15:41608136(-) A-G intron -    22484847
chr15:41609925(-) T-C intron -    22484847
chr15:41609946(-) T-C intron -    22484847
chr15:41610006(-) T-C intron -    22484847
chr15:41610010(-) T-C intron -    22484847
chr15:41610563(-) A-G intron -    22484847
chr15:41611033(-) A-G intron -    22484847
chr15:41611139(-) T-C intron -    22484847
chr15:41611583(-) T-C intron -    22484847
chr15:41611726(-) T-C intron -    22484847
chr15:41614651(-) A-G intron -    22484847
chr15:41614717(-) A-G intron -    22484847
chr15:41615425(-) T-C intron -    22484847
chr15:41622785(-) A-G intron -    22484847
chr15:41623723(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase OIP5
chr15:41624472-41624473(-) m6A CDS       27773536
chr15:41624703-41624704(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate OIP5
Chromatin K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleus HeLa-S3 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H2
Interactor2: OIP5

Evidence Support:


Prediction-Evidence cRep//miRanda
Support Database RepTar//VmiReg

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