Basic Information:

  VIRBase ID:  

VHID00162767

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H2:  MIMAT0010205          FZD1:  NM_003505     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H2	FZD1
miRBase Accession/Entrez ID	MIMAT0010205	8321
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FZD1	chr7:90893722-90893723(+) m6A 5'UTR       - chr7:90893744-90893745(+) m6A 5'UTR       - chr7:90893952-90893953(+) m6A 5'UTR       24209618 chr7:90894049-90894050(+) m6A 5'UTR       - chr7:90894254-90894255(+) m6A CDS       24209618//25456834//24981863 chr7:90894529-90894530(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr7:90894571-90894572(+) m6A CDS       24284625//25456834//24981863//22608085 chr7:90894588-90894589(+) m6A CDS       24284625//25456834//24981863//22608085 chr7:90894619-90894620(+) m6A CDS       24284625//25456834//24981863//22608085 chr7:90894802-90894803(+) m6A CDS       24284625//24981863 chr7:90894826-90894827(+) m6A CDS       24284625//24981863 chr7:90894886-90894887(+) m6A CDS       22608085 chr7:90894936-90894937(+) m6A CDS       22608085 chr7:90895078-90895079(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr7:90895225-90895226(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr7:90895324-90895325(+) m6A CDS       24284625//24981863//22608085 chr7:90895569-90895570(+) m6A CDS       24284625//22608085 chr7:90895773-90895774(+) m6A CDS       24284625//24981863//22608085 chr7:90895882-90895883(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr7:90895990-90895991(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr7:90896070-90896071(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr7:90896117-90896118(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr7:90896127-90896128(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr7:90896140-90896141(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr7:90896247-90896248(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr7:90896274-90896275(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr7:90896317-90896318(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr7:90896349-90896350(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr7:90896382-90896383(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr7:90896906-90896907(+) m6A 3'UTR       24284625 chr7:90896988-90896989(+) m6A 3'UTR       24209618 chr7:90897187-90897188(+) m6A 3'UTR       24284625 chr7:90897358-90897359(+) m6A 3'UTR       22608085 chr7:90897372-90897373(+) m6A 3'UTR       22608085 chr7:90897385-90897386(+) m6A 3'UTR       22608085 chr7:90897411-90897412(+) m6A 3'UTR       24981863//22608085 chr7:90897460-90897461(+) m6A 3'UTR       24981863//22608085 chr7:90897473-90897474(+) m6A 3'UTR       24981863//22608085 chr7:90897548-90897549(+) m6A 3'UTR       22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	FZD1	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H2
Interactor2: FZD1

Evidence Support:

Prediction-Evidence	miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg