Basic Information:

  VIRBase ID:  

VHID00161967

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H2:  MIMAT0010205          FTH1:  NM_002032     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H2	FTH1
miRBase Accession/Entrez ID	MIMAT0010205	2495
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FHC//FTH//FTHL6//HFE5//PIG15//PLIF

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	FTH1	chr11:61728082(-) A-I      intronic chr11:61727957(-) A-I      intronic chr11:61727954(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FTH1	chr11:61732217-61732218(-) m6A 3'UTR//CDS//intron       27773535//22575960 chr11:61732344-61732345(-) m6A 3'UTR//CDS//exon//intron       27773535//22575960 chr11:61732445-61732446(-) m6A exon//intron       24981863 chr11:61732485-61732486(-) m6A 3'UTR//CDS//exon//intron       24981863 chr11:61732494-61732495(-) m6A 3'UTR//CDS//exon//intron       24981863 chr11:61732576-61732577(-) m6A 3'UTR//CDS//exon//intron       24981863//27773535 chr11:61732581-61732582(-) m6A 3'UTR//CDS//exon//intron       24981863//27773535 chr11:61732696-61732697(-) m6A exon//intron       24981863 chr11:61732835-61732836(-) m6A exon//intron       24981863 chr11:61732877-61732878(-) m6A 3'UTR//CDS//exon//intron       24981863 chr11:61732949-61732950(-) m6A 3'UTR//5'UTR//CDS//exon//intron       27773535//22575960 chr11:61734496-61734497(-) m6A 5'UTR//intron       27773535//22575960 chr11:61734528-61734529(-) m6A 5'UTR//intron       27773535 chr11:61734635-61734636(-) m6A 5'UTR//intron       24284625//24209618//28052920//27773535//22575960 chr11:61734850-61734851(-) m6A CDS//exon//intron       24284625//24209618//24981863//28052920//27773535//27371828//27773536//22575960 chr11:61734862-61734863(-) m6A CDS//exon//intron       24284625//24209618//24981863//28052920//27773535//27371828//27773536//22575960 chr11:61734973-61734974(-) m6A 5'UTR//exon//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr11:61735046-61735047(-) m6A 5'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr11:61735124-61735125(-) m6A 5'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	FTH1	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HeLa-S3 cells|K562 cells     - Ribosome-free cytosol Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H2
Interactor2: FTH1

Evidence Support:

Prediction-Evidence	cRep//miRanda
Support Database	RepTar//VmiReg