Basic Information:

  VIRBase ID:  

VHID00161590

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H2:  MIMAT0010205          ADRA1A:  NR_136343     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H2	ADRA1A
miRBase Accession/Entrez ID	MIMAT0010205	148
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ADRA1C//ADRA1L1//ALPHA1AAR

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ADRA1A	chr8:26663240(-) A-I      intronic chr8:26663236(-) A-I      intronic chr8:26663243(-) A-I      intronic chr8:26708137(-) A-I      intronic chr8:26664443(-) A-I      intronic chr8:26663244(-) A-I      intronic chr8:26663289(-) A-I      intronic chr8:26664385(-) A-I      intronic chr8:26664388(-) A-I      intronic chr8:26663277(-) A-I      intronic chr8:26664442(-) A-I      intronic chr8:26708157(-) A-I      intronic chr8:26708084(-) A-I      intronic chr8:26664431(-) A-I      intronic chr8:26708089(-) A-I      intronic chr8:26663227(-) A-I      intronic chr8:26708109(-) A-I      intronic chr8:26655691(-) A-I      intronic chr8:26654930(-) A-I      intronic chr8:26632134(-) A-I      intronic chr8:26708150(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ADRA1A	chr8:26606185(-) A-C exon CDS    21725310 chr8:26606185(-) A-T exon CDS    21725310

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ADRA1A	chr8:26627529-26627530(-) m6A 3'UTR//intron       25456834 chr8:26627556-26627557(-) m6A 3'UTR//intron       25456834 chr8:26627572-26627573(-) m6A 3'UTR//intron       25456834 chr8:26627577-26627578(-) m6A 3'UTR//intron       25456834 chr8:26627582-26627583(-) m6A 3'UTR//intron       25456834 chr8:26721729-26721730(-) m6A CDS       27773536 chr8:26721803-26721804(-) m6A CDS       27773536 chr8:26721816-26721817(-) m6A CDS       27773536 chr8:26722488-26722489(-) m6A 5'UTR       27773536 chr8:26722510-26722511(-) m6A 5'UTR       27773536 chr8:26722518-26722519(-) m6A 5'UTR       27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ADRA1A	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H2
Interactor2: ADRA1A

Evidence Support:

Prediction-Evidence	cRep//Targetscan
Support Database	RepTar//VmiReg