Basic Information:

  VIRBase ID:  

VHID00161488

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H4-3p:  MIMAT0010204          BMP8A:  NM_181809     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H4-3p	BMP8A
miRBase Accession/Entrez ID	MIMAT0010204	353500
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	OP-2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	BMP8A	chr1:39971956(+) A-I      intronic chr1:39971975(+) A-I      intronic chr1:39994514(+) A-I      3'UTR chr1:39994525(+) A-I      3'UTR chr1:39994530(+) A-I      3'UTR chr1:39971962(+) A-I      intronic chr1:39971961(+) A-I      intronic chr1:39994512(+) A-I      3'UTR chr1:39972081(+) A-I      intronic chr1:39973802(+) A-I      intronic chr1:39967733(+) A-I      intronic chr1:39971946(+) A-I      intronic chr1:39966546(+) A-I      intronic chr1:39967325(+) A-I      intronic chr1:39972022(+) A-I      intronic chr1:39968632(+) A-I      intronic chr1:39972026(+) A-I      intronic chr1:39969111(+) A-I      intronic chr1:39968633(+) A-I      intronic chr1:39968949(+) A-I      intronic chr1:39972090(+) A-I      intronic chr1:39969387(+) A-I      intronic chr1:39960156(+) A-I      intronic chr1:39966535(+) A-I      intronic chr1:39992213(+) A-I      3'UTR chr1:39992208(+) A-I      3'UTR chr1:39992150(+) A-I      3'UTR chr1:39992140(+) A-I      3'UTR chr1:39992128(+) A-I      3'UTR chr1:39992111(+) A-I      3'UTR chr1:39992091(+) A-I      3'UTR chr1:39992030(+) A-I      3'UTR chr1:39967120(+) A-I      intronic chr1:39967914(+) A-I      intronic chr1:39968863(+) A-I      intronic chr1:39967397(+) A-I      intronic chr1:39968868(+) A-I      intronic chr1:39971534(+) A-I      intronic chr1:39973932(+) A-I      intronic chr1:39967654(+) A-I      intronic chr1:39971453(+) A-I      intronic chr1:39969528(+) A-I      intronic chr1:39968850(+) A-I      intronic chr1:39968866(+) A-I      intronic chr1:39960092(+) A-I      intronic chr1:39971531(+) A-I      intronic chr1:39971398(+) A-I      intronic chr1:39968603(+) A-I      intronic chr1:39971399(+) A-I      intronic chr1:39968539(+) A-I      intronic chr1:39971507(+) A-I      intronic chr1:39968883(+) A-I      intronic chr1:39960229(+) A-I      intronic chr1:39968581(+) A-I      intronic chr1:39969000(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	BMP8A	chr1:39967120(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	BMP8A	chr1:39988140-39988141(+) m6A CDS       - chr1:39988745-39988746(+) m6A CDS       27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	BMP8A	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H4-3p
Interactor2: BMP8A

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA
Support Database	RepTar//VmiReg