Basic Information:

  VIRBase ID:  

VHID00161430

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H4-3p:  MIMAT0010204          RHBDL3:  NM_001363835     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H4-3p	RHBDL3
miRBase Accession/Entrez ID	MIMAT0010204	162494
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	RHBDL4//VRHO

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	RHBDL3	chr17:30619658(+) A-I      intronic chr17:30619684(+) A-I      intronic chr17:30645026(+) A-I      intronic chr17:30605981(+) A-I      intronic chr17:30645049(+) A-I      intronic chr17:30645046(+) A-I      intronic chr17:30605984(+) A-I      intronic chr17:30605964(+) A-I      intronic chr17:30605988(+) A-I      intronic chr17:30605996(+) A-I      intronic chr17:30619647(+) A-I      intronic chr17:30645042(+) A-I      intronic chr17:30600912(+) A-I      intronic chr17:30609348(+) A-I      intronic chr17:30618231(+) A-I      intronic chr17:30619667(+) A-I      intronic chr17:30619710(+) A-I      intronic chr17:30620522(+) A-I      intronic chr17:30621093(+) A-I      intronic chr17:30624301(+) A-I      intronic chr17:30624303(+) A-I      intronic chr17:30628084(+) A-I      intronic chr17:30628664(+) A-I      intronic chr17:30633769(+) A-I      intronic chr17:30631941(+) A-I      intronic chr17:30628593(+) A-I      intronic chr17:30632037(+) A-I      intronic chr17:30600920(+) A-I      intronic chr17:30605152(+) A-I      intronic chr17:30600935(+) A-I      intronic chr17:30605227(+) A-I      intronic chr17:30609330(+) A-I      intronic chr17:30639637(+) A-I      intronic chr17:30633780(+) A-I      intronic chr17:30639636(+) A-I      intronic chr17:30633781(+) A-I      intronic chr17:30633779(+) A-I      intronic chr17:30597067(+) A-I      intronic chr17:30640290(+) A-I      intronic chr17:30601615(+) A-I      intronic chr17:30601016(+) A-I      intronic chr17:30647037(+) A-I      intronic chr17:30605267(+) A-I      intronic chr17:30637625(+) A-I      intronic chr17:30631987(+) A-I      intronic chr17:30619661(+) A-I      intronic chr17:30641039(+) A-I      intronic chr17:30618546(+) A-I      intronic chr17:30632112(+) A-I      intronic chr17:30609915(+) A-I      intronic chr17:30619676(+) A-I      intronic chr17:30637611(+) A-I      intronic chr17:30639746(+) A-I      intronic chr17:30639374(+) A-I      intronic chr17:30617760(+) A-I      intronic chr17:30609903(+) A-I      intronic chr17:30639379(+) A-I      intronic chr17:30596228(+) A-I      intronic chr17:30609493(+) A-I      intronic chr17:30609848(+) A-I      intronic chr17:30647404(+) A-I      intronic chr17:30619639(+) A-I      intronic chr17:30609884(+) A-I      intronic chr17:30618593(+) A-I      intronic chr17:30624728(+) A-I      intronic chr17:30623459(+) A-I      intronic chr17:30596308(+) A-I      intronic chr17:30637815(+) A-I      intronic chr17:30618855(+) A-I      intronic chr17:30624104(+) A-I      intronic chr17:30647034(+) A-I      intronic chr17:30597071(+) A-I      intronic chr17:30636928(+) A-I      intronic chr17:30637628(+) A-I      intronic chr17:30639369(+) A-I      intronic chr17:30618628(+) A-I      intronic chr17:30618842(+) A-I      intronic chr17:30596165(+) A-I      intronic chr17:30639851(+) A-I      intronic chr17:30620481(+) A-I      intronic chr17:30640222(+) A-I      intronic chr17:30618589(+) A-I      intronic chr17:30635392(+) A-I      intronic chr17:30640043(+) A-I      intronic chr17:30640056(+) A-I      intronic chr17:30601622(+) A-I      intronic chr17:30639630(+) A-I      intronic chr17:30596133(+) A-I      intronic chr17:30633738(+) A-I      intronic chr17:30637020(+) A-I      intronic chr17:30601629(+) A-I      intronic chr17:30647482(+) A-I      intronic chr17:30647105(+) A-I      intronic chr17:30609400(+) A-I      intronic chr17:30619663(+) A-I      intronic chr17:30618090(+) A-I      intronic chr17:30628584(+) A-I      intronic chr17:30600778(+) A-I      intronic chr17:30637621(+) A-I      intronic chr17:30640174(+) A-I      intronic chr17:30635386(+) A-I      intronic chr17:30600100(+) A-I      intronic chr17:30618920(+) A-I      intronic chr17:30631955(+) A-I      intronic chr17:30647523(+) A-I      intronic chr17:30639569(+) A-I      intronic chr17:30627493(+) A-I      intronic chr17:30647526(+) A-I      intronic chr17:30640121(+) A-I      intronic chr17:30640002(+) A-I      intronic chr17:30621049(+) A-I      intronic chr17:30605888(+) A-I      intronic chr17:30629476(+) A-I      intronic chr17:30639320(+) A-I      intronic chr17:30609317(+) A-I      intronic chr17:30618891(+) A-I      intronic chr17:30636964(+) A-I      intronic chr17:30624436(+) A-I      intronic chr17:30619595(+) A-I      intronic chr17:30609783(+) A-I      intronic chr17:30640085(+) A-I      intronic chr17:30647605(+) A-I      intronic chr17:30647508(+) A-I      intronic chr17:30596118(+) A-I      intronic chr17:30597959(+) A-I      intronic chr17:30639654(+) A-I      intronic chr17:30618076(+) A-I      intronic chr17:30637501(+) A-I      intronic chr17:30618150(+) A-I      intronic chr17:30647063(+) A-I      intronic chr17:30618498(+) A-I      intronic chr17:30596381(+) A-I      intronic chr17:30619592(+) A-I      intronic chr17:30639561(+) A-I      intronic chr17:30609510(+) A-I      intronic chr17:30636316(+) A-I      intronic chr17:30645423(+) A-I      intronic chr17:30640272(+) A-I      intronic chr17:30609308(+) A-I      intronic chr17:30624042(+) A-I      intronic chr17:30639255(+) A-I      intronic chr17:30627298(+) A-I      intronic chr17:30623058(+) A-I      intronic chr17:30600855(+) A-I      intronic chr17:30637652(+) A-I      intronic chr17:30629505(+) A-I      intronic chr17:30640300(+) A-I      intronic chr17:30618632(+) A-I      intronic chr17:30637479(+) A-I      intronic chr17:30609592(+) A-I      intronic chr17:30639441(+) A-I      intronic chr17:30627498(+) A-I      intronic chr17:30640193(+) A-I      intronic chr17:30639290(+) A-I      intronic chr17:30635340(+) A-I      intronic chr17:30640961(+) A-I      intronic chr17:30605062(+) A-I      intronic chr17:30618521(+) A-I      intronic chr17:30647175(+) A-I      intronic chr17:30640952(+) A-I      intronic chr17:30605809(+) A-I      intronic chr17:30639698(+) A-I      intronic chr17:30639438(+) A-I      intronic chr17:30641476(+) A-I      intronic chr17:30639971(+) A-I      intronic chr17:30596349(+) A-I      intronic chr17:30639789(+) A-I      intronic chr17:30619669(+) A-I      intronic chr17:30609480(+) A-I      intronic chr17:30637030(+) A-I      intronic chr17:30601007(+) A-I      intronic chr17:30622818(+) A-I      intronic chr17:30596147(+) A-I      intronic chr17:30596316(+) A-I      intronic chr17:30609550(+) A-I      intronic chr17:30620490(+) A-I      intronic chr17:30628400(+) A-I      intronic chr17:30596338(+) A-I      intronic chr17:30609357(+) A-I      intronic chr17:30619051(+) A-I      intronic chr17:30621995(+) A-I      intronic chr17:30610616(+) A-I      intronic chr17:30647460(+) A-I      intronic chr17:30609331(+) A-I      intronic chr17:30606013(+) A-I      intronic chr17:30639307(+) A-I      intronic chr17:30624361(+) A-I      intronic chr17:30596287(+) A-I      intronic chr17:30629469(+) A-I      intronic chr17:30600806(+) A-I      intronic chr17:30633257(+) A-I      intronic chr17:30619063(+) A-I      intronic chr17:30639852(+) A-I      intronic chr17:30640983(+) A-I      intronic chr17:30609404(+) A-I      intronic chr17:30609475(+) A-I      intronic chr17:30609663(+) A-I      intronic chr17:30636968(+) A-I      intronic chr17:30597379(+) A-I      intronic chr17:30618620(+) A-I      intronic chr17:30596233(+) A-I      intronic chr17:30600185(+) A-I      intronic chr17:30641040(+) A-I      intronic chr17:30623484(+) A-I      intronic chr17:30639331(+) A-I      intronic chr17:30624781(+) A-I      intronic chr17:30646114(+) A-I      intronic chr17:30639678(+) A-I      intronic chr17:30640975(+) A-I      intronic chr17:30640084(+) A-I      intronic chr17:30596220(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	RHBDL3	chr17:30596118(+) A-I intron -    15342557 chr17:30596147(+) A-I intron -    15342557 chr17:30596220(+) A-I intron -    15342557 chr17:30596287(+) A-I intron -    15342557 chr17:30596349(+) A-I intron -    15342557 chr17:30597067(+) A-G intron -    22484847 chr17:30597071(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RHBDL3	chr17:30648111-30648112(+) m6A 3'UTR//CDS       25456834//24981863 chr17:30648132-30648133(+) m6A 3'UTR//CDS       24209618//25456834//24981863//22608085 chr17:30648198-30648199(+) m6A 3'UTR//CDS       25456834//24981863//22608085 chr17:30648222-30648223(+) m6A 3'UTR//CDS       24284625//25456834//24981863//22608085 chr17:30648347-30648348(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22608085 chr17:30648353-30648354(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22608085 chr17:30648360-30648361(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22608085 chr17:30648396-30648397(+) m6A 3'UTR       24209618//25456834//24981863//22608085 chr17:30648409-30648410(+) m6A 3'UTR       24209618//25456834//24981863//22608085 chr17:30648623-30648624(+) m6A 3'UTR       25456834//24981863 chr17:30648633-30648634(+) m6A 3'UTR       25456834//24981863 chr17:30651115-30651116(+) m6A 3'UTR       25456834//24981863 chr17:30651138-30651139(+) m6A 3'UTR       25456834//24981863 chr17:30651151-30651152(+) m6A 3'UTR       25456834//24981863//22608085 chr17:30651190-30651191(+) m6A 3'UTR       25456834//24981863//22608085 chr17:30651205-30651206(+) m6A 3'UTR       25456834//24981863//22608085 chr17:30651306-30651307(+) m6A 3'UTR       24981863//22608085 chr17:30651325-30651326(+) m6A 3'UTR       22608085 chr17:30651506-30651507(+) m6A 3'UTR       24981863//22608085 chr17:30651523-30651524(+) m6A 3'UTR       24981863//22608085 chr17:30651538-30651539(+) m6A 3'UTR       24981863//22608085 chr17:30651557-30651558(+) m6A 3'UTR       24981863//22608085 chr17:30651562-30651563(+) m6A 3'UTR       24981863//22608085 chr17:30651568-30651569(+) m6A 3'UTR       24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RHBDL3	Cytosol HCC cell line (HepG2)     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H4-3p
Interactor2: RHBDL3

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg