Basic Information:

  VIRBase ID:  

VHID00161409

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H4-3p:  MIMAT0010204          ZNF664:  NM_001204298     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H4-3p	ZNF664
miRBase Accession/Entrez ID	MIMAT0010204	144348
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ZFOC1//ZNF176

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZNF664	chr12:124460173(+) A-I      intronic chr12:124461473(+) A-I      intronic chr12:124461468(+) A-I      intronic chr12:124461476(+) A-I      intronic chr12:124461516(+) A-I      intronic chr12:124464301(+) A-I      intronic chr12:124461465(+) A-I      intronic chr12:124460146(+) A-I      intronic chr12:124460033(+) A-I      intronic chr12:124460105(+) A-I      intronic chr12:124467595(+) A-I      intronic chr12:124467543(+) A-I      intronic chr12:124461582(+) A-I      intronic chr12:124467552(+) A-I      intronic chr12:124464431(+) A-I      intronic chr12:124467537(+) A-I      intronic chr12:124460225(+) A-I      intronic chr12:124461547(+) A-I      intronic chr12:124461466(+) A-I      intronic chr12:124461370(+) A-I      intronic chr12:124464511(+) A-I      intronic chr12:124464505(+) A-I      intronic chr12:124461474(+) A-I      intronic chr12:124461372(+) A-I      intronic chr12:124464436(+) A-I      intronic chr12:124467516(+) A-I      intronic chr12:124460133(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF664	chr12:124458571-124458572(+) m6A exon//intron       24284625 chr12:124458638-124458639(+) m6A exon//intron       24284625 chr12:124458678-124458679(+) m6A exon//intron       24284625//25456834 chr12:124458699-124458700(+) m6A exon//intron       24284625//25456834//24981863 chr12:124458754-124458755(+) m6A exon//intron       24284625//24209618//25456834//24981863 chr12:124458772-124458773(+) m6A exon//intron       24284625//24209618//25456834//24981863 chr12:124458786-124458787(+) m6A exon//intron       24284625//24209618//25456834//24981863 chr12:124458823-124458824(+) m6A exon//intron       24284625//24209618//25456834//24981863 chr12:124458828-124458829(+) m6A exon//intron       24284625//24209618//25456834//24981863 chr12:124458879-124458880(+) m6A exon//intron       24284625//24981863 chr12:124495978-124495979(+) m6A 5'UTR//exon       24284625//24981863//22608085 chr12:124496148-124496149(+) m6A 5'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:124496211-124496212(+) m6A 5'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:124496246-124496247(+) m6A 5'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:124496313-124496314(+) m6A 5'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr12:124496414-124496415(+) m6A 5'UTR       24284625//24209618//24981863//27773535//22608085 chr12:124496495-124496496(+) m6A 5'UTR       24284625//24209618//24981863//27773535//22608085 chr12:124496512-124496513(+) m6A 5'UTR       24284625//24209618//24981863//27773535//22608085 chr12:124496527-124496528(+) m6A 5'UTR       24284625//24209618//24981863//27773535//22608085 chr12:124496558-124496559(+) m6A 5'UTR       24284625//24209618//24981863//27773535//22608085 chr12:124496587-124496588(+) m6A 5'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr12:124496611-124496612(+) m6A 5'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr12:124496825-124496826(+) m6A CDS       24284625//24981863//27773535//22608085 chr12:124496845-124496846(+) m6A CDS       24284625//24981863//27773535//22608085 chr12:124496909-124496910(+) m6A CDS       24284625//24981863//27773535//22608085 chr12:124496918-124496919(+) m6A CDS       24284625//24981863//27773535//22608085 chr12:124497197-124497198(+) m6A CDS       24284625 chr12:124497240-124497241(+) Y CDS       25219674//26075521 chr12:124497281-124497282(+) m6A CDS       24284625//24981863 chr12:124497365-124497366(+) m6A CDS       24981863//27773535 chr12:124497451-124497452(+) m6A CDS       24284625//24981863//27773535 chr12:124497507-124497508(+) m6A 3'UTR       24284625//24981863 chr12:124497532-124497533(+) m6A 3'UTR       24284625//24981863 chr12:124497585-124497586(+) m6A 3'UTR       24284625//24981863 chr12:124498698-124498699(+) m6A 3'UTR       24981863 chr12:124498791-124498792(+) Gm 3'UTR       - chr12:124498866-124498867(+) m6A 3'UTR       24284625//24981863 chr12:124499371-124499372(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZNF664	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H4-3p
Interactor2: ZNF664

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg