Basic Information:

  VIRBase ID:  

VHID00161168

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H4-3p:  MIMAT0010204          BOLA1:  NM_001321026     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H4-3p	BOLA1
miRBase Accession/Entrez ID	MIMAT0010204	51027
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CGI-143

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	BOLA1	chr1:149862227(+) A-I      intronic chr1:149862264(+) A-I      intronic chr1:149863272(+) A-I      intronic chr1:149859141(+) A-I      intronic chr1:149859428(+) A-I      intronic chr1:149859142(+) A-I      intronic chr1:149859197(+) A-I      intronic chr1:149859349(+) A-I      intronic chr1:149859391(+) A-I      intronic chr1:149859125(+) A-I      intronic chr1:149863882(+) A-I      intronic chr1:149864304(+) A-I      intronic chr1:149864365(+) A-I      intronic chr1:149864373(+) A-I      intronic chr1:149865092(+) A-I      intronic chr1:149868955(+) A-I      intronic chr1:149869126(+) A-I      intronic chr1:149864348(+) A-I      intronic chr1:149860962(+) A-I      intronic chr1:149860967(+) A-I      intronic chr1:149862304(+) A-I      intronic chr1:149862333(+) A-I      intronic chr1:149862724(+) A-I      intronic chr1:149862785(+) A-I      intronic chr1:149863768(+) A-I      intronic chr1:149863778(+) A-I      intronic chr1:149863873(+) A-I      intronic chr1:149863876(+) A-I      intronic chr1:149865151(+) A-I      intronic chr1:149868783(+) A-I      intronic chr1:149865152(+) A-I      intronic chr1:149862870(+) A-I      intronic chr1:149859134(+) A-I      intronic chr1:149861211(+) A-I      intronic chr1:149868901(+) A-I      intronic chr1:149868856(+) A-I      intronic chr1:149860926(+) A-I      intronic chr1:149868831(+) A-I      intronic chr1:149869159(+) A-I      intronic chr1:149862798(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	BOLA1	chr1:149871115-149871116(+) m6A 5'UTR       25456834//24981863 chr1:149871152-149871153(+) m6A 5'UTR       24284625//25456834//24981863 chr1:149871257-149871258(+) m6A 5'UTR//intron       24284625//24981863 chr1:149871807-149871808(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:149871848-149871849(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:149871939-149871940(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:149871961-149871962(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:149871973-149871974(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:149872000-149872001(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:149872008-149872009(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:149872017-149872018(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:149872026-149872027(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:149872043-149872044(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:149872124-149872125(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr1:149872196-149872197(+) m6A 3'UTR//exon       24284625//24209618//24981863//22608085 chr1:149872240-149872241(+) m6A 3'UTR//exon       24284625//24981863//22608085 chr1:149872298-149872299(+) m6A 3'UTR//exon       24284625//24981863//22608085 chr1:149872314-149872315(+) m6A 3'UTR//exon       24284625//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	BOLA1	Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H4-3p
Interactor2: BOLA1

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg