Basic Information:

  VIRBase ID:  

VHID00161157

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H4-3p:  MIMAT0010204          YPEL1:  NR_130910     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H4-3p	YPEL1
miRBase Accession/Entrez ID	MIMAT0010204	29799
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FKSG3

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	YPEL1	chr22:22077801(-) A-I      intronic chr22:22077785(-) A-I      intronic chr22:22059352(-) A-I      intronic chr22:22077778(-) A-I      intronic chr22:22069653(-) A-I      intronic chr22:22059366(-) A-I      intronic chr22:22084378(-) A-I      intronic chr22:22066932(-) A-I      intronic chr22:22065409(-) A-I      intronic chr22:22060401(-) A-I      intronic chr22:22077768(-) A-I      intronic chr22:22077826(-) A-I      intronic chr22:22077811(-) A-I      intronic chr22:22079411(-) A-I      intronic chr22:22079037(-) A-I      intronic chr22:22078955(-) A-I      intronic chr22:22078623(-) A-I      intronic chr22:22077935(-) A-I      intronic chr22:22077821(-) A-I      intronic chr22:22076526(-) A-I      intronic chr22:22074678(-) A-I      intronic chr22:22074238(-) A-I      intronic chr22:22087905(-) A-I      intronic chr22:22087844(-) A-I      intronic chr22:22084793(-) A-I      intronic chr22:22070346(-) A-I      intronic chr22:22070392(-) A-I      intronic chr22:22084731(-) A-I      intronic chr22:22084730(-) A-I      intronic chr22:22084690(-) A-I      intronic chr22:22084689(-) A-I      intronic chr22:22084585(-) A-I      intronic chr22:22083790(-) A-I      intronic chr22:22062690(-) A-I      intronic chr22:22070224(-) A-I      intronic chr22:22062710(-) A-I      intronic chr22:22069599(-) A-I      intronic chr22:22069619(-) A-I      intronic chr22:22062687(-) A-I      intronic chr22:22083478(-) A-I      intronic chr22:22083675(-) A-I      intronic chr22:22083380(-) A-I      intronic chr22:22083349(-) A-I      intronic chr22:22079724(-) A-I      intronic chr22:22070425(-) A-I      intronic chr22:22055843(-) A-I      intronic chr22:22055844(-) A-I      intronic chr22:22055862(-) A-I      intronic chr22:22056239(-) A-I      intronic chr22:22056245(-) A-I      intronic chr22:22056254(-) A-I      intronic chr22:22058711(-) A-I      intronic chr22:22058716(-) A-I      intronic chr22:22058729(-) A-I      intronic chr22:22061100(-) A-I      intronic chr22:22061542(-) A-I      intronic chr22:22062685(-) A-I      intronic chr22:22073930(-) A-I      intronic chr22:22075091(-) A-I      intronic chr22:22074436(-) A-I      intronic chr22:22076583(-) A-I      intronic chr22:22077836(-) A-I      intronic chr22:22084685(-) A-I      intronic chr22:22078149(-) A-I      intronic chr22:22085437(-) A-I      intronic chr22:22075845(-) A-I      intronic chr22:22078051(-) A-I      intronic chr22:22058766(-) A-I      intronic chr22:22087471(-) A-I      intronic chr22:22075850(-) A-I      intronic chr22:22079719(-) A-I      intronic chr22:22069549(-) A-I      intronic chr22:22062825(-) A-I      intronic chr22:22074217(-) A-I      intronic chr22:22077852(-) A-I      intronic chr22:22069976(-) A-I      intronic chr22:22066290(-) A-I      intronic chr22:22070374(-) A-I      intronic chr22:22077945(-) A-I      intronic chr22:22088393(-) A-I      intronic chr22:22059383(-) A-I      intronic chr22:22073956(-) A-I      intronic chr22:22063843(-) A-I      intronic chr22:22084580(-) A-I      intronic chr22:22061036(-) A-I      intronic chr22:22076543(-) A-I      intronic chr22:22078678(-) A-I      intronic chr22:22065424(-) A-I      intronic chr22:22077612(-) A-I      intronic chr22:22073908(-) A-I      intronic chr22:22078769(-) A-I      intronic chr22:22075203(-) A-I      intronic chr22:22069661(-) A-I      intronic chr22:22065506(-) A-I      intronic chr22:22061053(-) A-I      intronic chr22:22078646(-) A-I      intronic chr22:22073970(-) A-I      intronic chr22:22059340(-) A-I      intronic chr22:22084565(-) A-I      intronic chr22:22069617(-) A-I      intronic chr22:22077728(-) A-I      intronic chr22:22078972(-) A-I      intronic chr22:22062842(-) A-I      intronic chr22:22078975(-) A-I      intronic chr22:22076448(-) A-I      intronic chr22:22059557(-) A-I      intronic chr22:22084589(-) A-I      intronic chr22:22059409(-) A-I      intronic chr22:22074762(-) A-I      intronic chr22:22063893(-) A-I      intronic chr22:22060606(-) A-I      intronic chr22:22075379(-) A-I      intronic chr22:22075236(-) A-I      intronic chr22:22060552(-) A-I      intronic chr22:22084278(-) A-I      intronic chr22:22073917(-) A-I      intronic chr22:22062721(-) A-I      intronic chr22:22059563(-) A-I      intronic chr22:22070323(-) A-I      intronic chr22:22084297(-) A-I      intronic chr22:22077835(-) A-I      intronic chr22:22063062(-) A-I      intronic chr22:22084542(-) A-I      intronic chr22:22077795(-) A-I      intronic chr22:22061450(-) A-I      intronic chr22:22077794(-) A-I      intronic chr22:22075914(-) A-I      intronic chr22:22066458(-) A-I      intronic chr22:22076757(-) A-I      intronic chr22:22075209(-) A-I      intronic chr22:22054946(-) A-I      3'UTR chr22:22054901(-) A-I      3'UTR chr22:22084785(-) A-I      intronic chr22:22063128(-) A-I      intronic chr22:22083042(-) A-I      intronic chr22:22063200(-) A-I      intronic chr22:22079790(-) A-I      intronic chr22:22061489(-) A-I      intronic chr22:22075810(-) A-I      intronic chr22:22084319(-) A-I      intronic chr22:22079470(-) A-I      intronic chr22:22060264(-) A-I      intronic chr22:22076642(-) A-I      intronic chr22:22078228(-) A-I      intronic chr22:22060535(-) A-I      intronic chr22:22084749(-) A-I      intronic chr22:22083106(-) A-I      intronic chr22:22079744(-) A-I      intronic chr22:22059484(-) A-I      intronic chr22:22074690(-) A-I      intronic chr22:22084605(-) A-I      intronic chr22:22061097(-) A-I      intronic chr22:22070226(-) A-I      intronic chr22:22061675(-) A-I      intronic chr22:22074632(-) A-I      intronic chr22:22070391(-) A-I      intronic chr22:22074391(-) A-I      intronic chr22:22058689(-) A-I      intronic chr22:22079723(-) A-I      intronic chr22:22078060(-) A-I      intronic chr22:22069590(-) A-I      intronic chr22:22069995(-) A-I      intronic chr22:22063124(-) A-I      intronic chr22:22074586(-) A-I      intronic chr22:22060930(-) A-I      intronic chr22:22069540(-) A-I      intronic chr22:22083517(-) A-I      intronic chr22:22087541(-) A-I      intronic chr22:22059532(-) A-I      intronic chr22:22079043(-) A-I      intronic chr22:22078663(-) A-I      intronic chr22:22076691(-) A-I      intronic chr22:22078622(-) A-I      intronic chr22:22061584(-) A-I      intronic chr22:22084677(-) A-I      intronic chr22:22076622(-) A-I      intronic chr22:22066743(-) A-I      intronic chr22:22074148(-) A-I      intronic chr22:22077551(-) A-I      intronic chr22:22079335(-) A-I      intronic chr22:22061027(-) A-I      intronic chr22:22079647(-) A-I      intronic chr22:22084673(-) A-I      intronic chr22:22060918(-) A-I      intronic chr22:22079380(-) A-I      intronic chr22:22083578(-) A-I      intronic chr22:22078634(-) A-I      intronic chr22:22076463(-) A-I      intronic chr22:22061090(-) A-I      intronic chr22:22061502(-) A-I      intronic chr22:22070189(-) A-I      intronic chr22:22078206(-) A-I      intronic chr22:22059403(-) A-I      intronic chr22:22066369(-) A-I      intronic chr22:22060943(-) A-I      intronic chr22:22079071(-) A-I      intronic chr22:22083230(-) A-I      intronic chr22:22077622(-) A-I      intronic chr22:22084301(-) A-I      intronic chr22:22078576(-) A-I      intronic chr22:22062893(-) A-I      intronic chr22:22076900(-) A-I      intronic chr22:22058899(-) A-I      intronic chr22:22076862(-) A-I      intronic chr22:22060476(-) A-I      intronic chr22:22059426(-) A-I      intronic chr22:22060986(-) A-I      intronic chr22:22063084(-) A-I      intronic chr22:22083346(-) A-I      intronic chr22:22055782(-) A-I      intronic chr22:22078079(-) A-I      intronic chr22:22059495(-) A-I      intronic chr22:22076830(-) A-I      intronic chr22:22070453(-) A-I      intronic chr22:22063808(-) A-I      intronic chr22:22060878(-) A-I      intronic chr22:22078093(-) A-I      intronic chr22:22066450(-) A-I      intronic chr22:22079372(-) A-I      intronic chr22:22072410(-) A-I      intronic chr22:22084220(-) A-I      intronic chr22:22062848(-) A-I      intronic chr22:22076747(-) A-I      intronic chr22:22065450(-) A-I      intronic chr22:22083537(-) A-I      intronic chr22:22066958(-) A-I      intronic chr22:22075921(-) A-I      intronic chr22:22059351(-) A-I      intronic chr22:22070297(-) A-I      intronic chr22:22074845(-) A-I      intronic chr22:22065493(-) A-I      intronic chr22:22070198(-) A-I      intronic chr22:22059419(-) A-I      intronic chr22:22062866(-) A-I      intronic chr22:22079464(-) A-I      intronic chr22:22069736(-) A-I      intronic chr22:22088293(-) A-I      intronic chr22:22066300(-) A-I      intronic chr22:22074225(-) A-I      intronic chr22:22069602(-) A-I      intronic chr22:22076593(-) A-I      intronic chr22:22074918(-) A-I      intronic chr22:22084245(-) A-I      intronic chr22:22058851(-) A-I      intronic chr22:22078978(-) A-I      intronic chr22:22084651(-) A-I      intronic chr22:22059541(-) A-I      intronic chr22:22076597(-) A-I      intronic chr22:22075539(-) A-I      intronic chr22:22074615(-) A-I      intronic chr22:22079325(-) A-I      intronic chr22:22065494(-) A-I      intronic chr22:22088269(-) A-I      intronic chr22:22070229(-) A-I      intronic chr22:22087869(-) A-I      intronic chr22:22079141(-) A-I      intronic chr22:22077616(-) A-I      intronic chr22:22059485(-) A-I      intronic chr22:22084332(-) A-I      intronic chr22:22084317(-) A-I      intronic chr22:22083096(-) A-I      intronic chr22:22078583(-) A-I      intronic chr22:22062746(-) A-I      intronic chr22:22079683(-) A-I      intronic chr22:22065421(-) A-I      intronic chr22:22063847(-) A-I      intronic chr22:22072563(-) A-I      intronic chr22:22061073(-) A-I      intronic chr22:22076465(-) A-I      intronic chr22:22058702(-) A-I      intronic chr22:22088493(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	YPEL1	chr22:22061097(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	YPEL1	chr22:22051940-22051941(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr22:22052076-22052077(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr22:22052091-22052092(-) m6A 3'UTR       24981863//27773535//22608085 chr22:22052095-22052096(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr22:22052099-22052100(-) m6A 3'UTR       24981863//27773535//22608085 chr22:22052119-22052120(-) m6A 3'UTR       24981863//27773535//22608085 chr22:22052724-22052725(-) m6A 3'UTR       25456834//22608085 chr22:22052733-22052734(-) m6A 3'UTR       25456834//24981863//27371828//22608085 chr22:22052780-22052781(-) m6A 3'UTR       25456834//24981863//27371828//22608085 chr22:22052825-22052826(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22608085 chr22:22052835-22052836(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22608085 chr22:22052858-22052859(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22608085 chr22:22052905-22052906(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22608085 chr22:22052916-22052917(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22608085 chr22:22052951-22052952(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22608085 chr22:22052970-22052971(-) m6A 3'UTR       24284625//25456834//24981863//27371828//22608085 chr22:22053445-22053446(-) m6A 3'UTR       27371828 chr22:22053451-22053452(-) m6A 3'UTR       27371828 chr22:22053548-22053549(-) m6A 3'UTR       27371828 chr22:22055371-22055372(-) m6A 3'UTR//exon       24284625//24981863//27371828//22608085 chr22:22055409-22055410(-) m6A 3'UTR//exon       24284625//24981863//27371828//22608085 chr22:22055433-22055434(-) m6A CDS//exon       24284625//24981863//22608085 chr22:22057678-22057679(-) m6A CDS//exon       22608085 chr22:22057686-22057687(-) m6A CDS//exon       22608085 chr22:22064986-22064987(-) m6A CDS//exon       - chr22:22065008-22065009(-) m6A CDS//exon       - chr22:22065068-22065069(-) m6A 5'UTR//exon       - chr22:22089916-22089917(-) m6A 5'UTR//exon       27371828//27773536 chr22:22090078-22090079(-) m6A 5'UTR       27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	YPEL1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H4-3p
Interactor2: YPEL1

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg