Basic Information:

  VIRBase ID:  

VHID00160679

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H4-5p:  MIMAT0010203          ZNF662:  NM_001134656     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H4-5p	ZNF662
miRBase Accession/Entrez ID	MIMAT0010203	389114
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZNF662	chr3:42954435(+) A-I      intronic chr3:42954415(+) A-I      intronic chr3:42954384(+) A-I      intronic chr3:42954444(+) A-I      intronic chr3:42954449(+) A-I      intronic chr3:42954306(+) A-I      intronic chr3:42954295(+) A-I      intronic chr3:42954373(+) A-I      intronic chr3:42954293(+) A-I      intronic chr3:42954287(+) A-I      intronic chr3:42959448(+) A-I      3'UTR chr3:42959440(+) A-I      3'UTR chr3:42957986(+) A-I      3'UTR chr3:42958009(+) A-I      3'UTR chr3:42958025(+) A-I      3'UTR chr3:42958055(+) A-I      3'UTR chr3:42959379(+) A-I      3'UTR chr3:42959434(+) A-I      3'UTR chr3:42959526(+) A-I      3'UTR chr3:42959510(+) A-I      3'UTR chr3:42959477(+) A-I      3'UTR chr3:42954361(+) A-I      intronic chr3:42959588(+) A-I      3'UTR chr3:42959568(+) A-I      3'UTR chr3:42959412(+) A-I      3'UTR chr3:42959413(+) A-I      3'UTR chr3:42959403(+) A-I      3'UTR chr3:42959409(+) A-I      3'UTR chr3:42958130(+) A-I      3'UTR chr3:42959398(+) A-I      3'UTR chr3:42959519(+) A-I      3'UTR chr3:42957926(+) A-I      3'UTR chr3:42959451(+) A-I      3'UTR chr3:42959344(+) A-I      3'UTR chr3:42959417(+) A-I      3'UTR chr3:42959491(+) A-I      3'UTR chr3:42958058(+) A-I      3'UTR chr3:42959518(+) A-I      3'UTR chr3:42958067(+) A-I      3'UTR chr3:42958099(+) A-I      3'UTR chr3:42958041(+) A-I      3'UTR chr3:42957888(+) A-I      3'UTR chr3:42959478(+) A-I      3'UTR chr3:42959343(+) A-I      3'UTR chr3:42959504(+) A-I      3'UTR chr3:42957921(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ZNF662	chr3:42958041(+) A-I exon 3'UTR    15342557 chr3:42958063(+) A-I exon 3'UTR    15342557 chr3:42958067(+) A-I exon 3'UTR    15342557 chr3:42958099(+) A-I exon 3'UTR    15342557 chr3:42959343(+) A-I exon 3'UTR    15342557   //15258596 chr3:42959344(+) A-I exon 3'UTR    15342557   //15258596 chr3:42959365(+) A-I exon 3'UTR    15342557   //15258596 chr3:42959374(+) A-I exon 3'UTR    15342557   //15258596 chr3:42959397(+) A-I exon 3'UTR    15342557   //15258596 chr3:42959398(+) A-I exon 3'UTR    15342557   //15258596 chr3:42959403(+) A-I exon 3'UTR    15342557   //15258596 chr3:42959409(+) A-I exon 3'UTR    15342557   //15258596 chr3:42959412(+) A-I exon 3'UTR    15342557   //15258596 chr3:42959413(+) A-I exon 3'UTR    15342557   //15258596 chr3:42959417(+) A-I exon 3'UTR    15342557   //15258596 chr3:42959419(+) A-I exon 3'UTR    15342557   //15258596 chr3:42959451(+) A-I exon 3'UTR    15342557   //15258596 chr3:42959478(+) A-I exon 3'UTR    15342557   //15258596 chr3:42959487(+) A-I exon 3'UTR    15342557   //15258596 chr3:42959491(+) A-I exon 3'UTR    15342557   //15258596 chr3:42959504(+) A-I exon 3'UTR    15342557   //15258596 chr3:42959519(+) A-I exon 3'UTR    15342557   //15258596 chr3:42959568(+) A-I exon 3'UTR    15342557   //15258596

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF662	chr3:42955946-42955947(+) m6A CDS//exon//intron       - chr3:42956386-42956387(+) m6A CDS//exon//intron       - chr3:42956427-42956428(+) m6A CDS//exon//intron       - chr3:42956470-42956471(+) m6A CDS//exon//intron       - chr3:42956511-42956512(+) m6A CDS//exon//intron       24209618//24981863 chr3:42956571-42956572(+) m6A CDS//exon//intron       24209618//24981863 chr3:42956595-42956596(+) m6A CDS//exon//intron       24209618//24981863 chr3:42956634-42956635(+) m6A CDS//exon//intron       24209618//24981863 chr3:42956722-42956723(+) m6A CDS//exon//intron       24209618

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZNF662	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H4-5p
Interactor2: ZNF662

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg