Basic Information:

  VIRBase ID:  

VHID00160656

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H4-5p:  MIMAT0010203          ZNF568:  NM_001204839     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H4-5p	ZNF568
miRBase Accession/Entrez ID	MIMAT0010203	374900
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ZFP568

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZNF568	chr19:37437712(+) A-I      intronic chr19:37437739(+) A-I      intronic chr19:37437716(+) A-I      intronic chr19:37433380(+) A-I      intronic chr19:37433390(+) A-I      intronic chr19:37434603(+) A-I      intronic chr19:37434615(+) A-I      intronic chr19:37434616(+) A-I      intronic chr19:37434709(+) A-I      intronic chr19:37435121(+) A-I      intronic chr19:37433157(+) A-I      intronic chr19:37433010(+) A-I      intronic chr19:37419100(+) A-I      intronic chr19:37423288(+) A-I      intronic chr19:37420644(+) A-I      intronic chr19:37420634(+) A-I      intronic chr19:37419081(+) A-I      intronic chr19:37419003(+) A-I      intronic chr19:37418998(+) A-I      intronic chr19:37418934(+) A-I      intronic chr19:37415246(+) A-I      intronic chr19:37415547(+) A-I      intronic chr19:37415545(+) A-I      intronic chr19:37415531(+) A-I      intronic chr19:37415331(+) A-I      intronic chr19:37415323(+) A-I      intronic chr19:37438159(+) A-I      intronic chr19:37436756(+) A-I      intronic chr19:37435125(+) A-I      intronic chr19:37423398(+) A-I      intronic chr19:37437759(+) A-I      intronic chr19:37419085(+) A-I      intronic chr19:37434606(+) A-I      intronic chr19:37422444(+) A-I      intronic chr19:37434577(+) A-I      intronic chr19:37426382(+) A-I      intronic chr19:37437737(+) A-I      intronic chr19:37432942(+) A-I      intronic chr19:37433089(+) A-I      intronic chr19:37436876(+) A-I      intronic chr19:37437734(+) A-I      intronic chr19:37443149(+) A-I      3'UTR chr19:37443117(+) A-I      3'UTR chr19:37433064(+) A-I      intronic chr19:37443189(+) A-I      3'UTR chr19:37420424(+) A-I      intronic chr19:37443144(+) A-I      3'UTR chr19:37442647(+) A-I      3'UTR chr19:37443163(+) A-I      3'UTR chr19:37435054(+) A-I      intronic chr19:37434658(+) A-I      intronic chr19:37435179(+) A-I      intronic chr19:37433026(+) A-I      intronic chr19:37434684(+) A-I      intronic chr19:37434710(+) A-I      intronic chr19:37419088(+) A-I      intronic chr19:37442807(+) A-I      3'UTR chr19:37433106(+) A-I      intronic chr19:37437822(+) A-I      intronic chr19:37420726(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ZNF568	chr19:37472562(+) A-I intron -    15258596 chr19:37472595(+) A-I intron -    15258596 chr19:37472612(+) A-I intron -    15258596 chr19:37420199(+) A-G intron -    22484847 chr19:37443163(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF568	chr19:37407295-37407296(+) m6A 5'UTR       - chr19:37407332-37407333(+) m6A 5'UTR       - chr19:37407348-37407349(+) m6A 5'UTR       - chr19:37407409-37407410(+) m6A 5'UTR       - chr19:37407425-37407426(+) m6A 5'UTR       - chr19:37440554-37440555(+) m6A CDS//intron       22608085 chr19:37440570-37440571(+) m6A CDS//intron       24981863//22608085 chr19:37440612-37440613(+) m6A CDS//intron       24981863//22608085 chr19:37440623-37440624(+) m6A CDS//intron       24981863//22608085 chr19:37440660-37440661(+) m6A CDS//intron       24981863//22608085 chr19:37440681-37440682(+) m6A CDS//intron       24981863//22608085 chr19:37440738-37440739(+) m6A CDS//intron       22608085 chr19:37440743-37440744(+) m6A CDS//intron       22608085 chr19:37441023-37441024(+) m6A CDS//intron       22608085 chr19:37441050-37441051(+) m6A CDS//intron       22608085 chr19:37441517-37441518(+) m6A 3'UTR//CDS//intron       24981863 chr19:37441554-37441555(+) m6A 3'UTR//CDS//intron       24981863 chr19:37441601-37441602(+) m6A 3'UTR//CDS//intron       24981863 chr19:37441611-37441612(+) m6A 3'UTR//CDS//intron       24981863 chr19:37442104-37442105(+) m6A 3'UTR//intron       22608085 chr19:37442147-37442148(+) m6A 3'UTR//intron       22608085 chr19:37442163-37442164(+) m6A 3'UTR//intron       22608085 chr19:37487336-37487337(+) m6A CDS//exon       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZNF568	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H4-5p
Interactor2: ZNF568

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg