Basic Information:

  VIRBase ID:  

VHID00160638

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H4-5p:  MIMAT0010203          LRIT3:  NM_198506     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H4-5p	LRIT3
miRBase Accession/Entrez ID	MIMAT0010203	345193
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CSNB1F//FIGLER4

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	LRIT3	chr4:110772922-110772923(+) m6A 5'UTR//CDS       - chr4:110772939-110772940(+) m6A 5'UTR//CDS       - chr4:110772946-110772947(+) m6A 5'UTR//CDS       - chr4:110773003-110773004(+) m6A 5'UTR//CDS       - chr4:110773034-110773035(+) m6A 5'UTR//CDS       - chr4:110790971-110790972(+) m6A CDS       22608085 chr4:110790985-110790986(+) m6A CDS       22608085 chr4:110791351-110791352(+) m6A CDS       22608085 chr4:110791370-110791371(+) m6A CDS       22608085 chr4:110791390-110791391(+) m6A CDS       22608085 chr4:110791481-110791482(+) m6A CDS       22608085 chr4:110791502-110791503(+) m6A CDS       22608085 chr4:110791514-110791515(+) m6A CDS       22608085 chr4:110791539-110791540(+) m6A CDS       22608085 chr4:110791595-110791596(+) m6A CDS       22608085 chr4:110791728-110791729(+) m6A CDS       22608085 chr4:110791746-110791747(+) m6A CDS       22608085 chr4:110791777-110791778(+) m6A CDS       22608085 chr4:110791795-110791796(+) m6A CDS       22608085 chr4:110791834-110791835(+) m6A CDS       22608085 chr4:110791926-110791927(+) m6A CDS       22608085 chr4:110791978-110791979(+) m6A 3'UTR       22608085 chr4:110792025-110792026(+) m6A 3'UTR       22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	LRIT3	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H4-5p
Interactor2: LRIT3

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg