Basic Information:

  VIRBase ID:  

VHID00160564

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H4-5p:  MIMAT0010203          WDR72:  NR_102335     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H4-5p	WDR72
miRBase Accession/Entrez ID	MIMAT0010203	256764
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AI2A3

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	WDR72	chr15:53994913(-) A-I      intronic chr15:53997327(-) A-I      Syn:Ala->Ala

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	WDR72	chr15:53997327(-) A-I exon CDS    19478186

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	WDR72	chr15:53808559-53808560(-) m6A 3'UTR//exon       27773535 chr15:53808587-53808588(-) m6A 3'UTR//exon       27773535 chr15:53808620-53808621(-) m6A 3'UTR//exon       27773535 chr15:53808637-53808638(-) m6A 3'UTR//exon       27773535 chr15:53808739-53808740(-) m6A 3'UTR//exon       24981863//27773535 chr15:53808767-53808768(-) m6A 3'UTR//exon       24981863//27773535 chr15:53808819-53808820(-) m6A 3'UTR//exon       27773535 chr15:53907681-53907682(-) m6A CDS       24981863//26404942//27773535 chr15:53907796-53907797(-) m6A CDS       24981863//26404942//27773535 chr15:53907835-53907836(-) m6A CDS       24981863//27773535 chr15:53908024-53908025(-) m6A CDS       24981863//27773535 chr15:53908208-53908209(-) m6A CDS       24209618//24981863//26404942//27773535 chr15:53908232-53908233(-) m6A CDS       24981863//26404942//27773535 chr15:53908329-53908330(-) m6A CDS       24981863//26404942//27773535 chr15:53908339-53908340(-) m6A CDS       24981863//26404942//27773535 chr15:53908388-53908389(-) m6A CDS       24981863 chr15:53908413-53908414(-) m6A CDS       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	WDR72	Exosome Blood     - Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H4-5p
Interactor2: WDR72

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg