Basic Information:

  VIRBase ID:  

VHID00160556

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H4-5p:  MIMAT0010203          ZDHHC23:  NM_173570     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H4-5p	ZDHHC23
miRBase Accession/Entrez ID	MIMAT0010203	254887
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	DHHC-23//NIDD

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZDHHC23	chr3:113667734-113667735(+) Tm CDS       - chr3:113667755-113667756(+) m6A CDS       24284625//24981863//22608085 chr3:113672577-113672578(+) m6A CDS       24284625//24209618//24981863//22608085 chr3:113672650-113672651(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr3:113672792-113672793(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr3:113672819-113672820(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr3:113673045-113673046(+) m6A CDS       24284625//25456834//24981863//22608085 chr3:113673067-113673068(+) m6A CDS       24284625//25456834//24981863//22608085 chr3:113673160-113673161(+) m6A CDS       24284625//25456834//24981863//22608085 chr3:113677345-113677346(+) m6A CDS//exon       24284625//22608085 chr3:113677379-113677380(+) m6A CDS//exon       24284625//25456834//24981863//22608085 chr3:113677412-113677413(+) m6A exon//intron       24284625//25456834//24981863//22608085 chr3:113677466-113677467(+) m6A exon//intron       24284625 chr3:113677605-113677606(+) m6A exon//intron       24284625//24981863//22608085 chr3:113677651-113677652(+) m6A exon//intron       24284625//24981863//22608085 chr3:113677723-113677724(+) m6A exon//intron       24284625//24981863//22608085 chr3:113678409-113678410(+) m6A 3'UTR//exon//intron       24981863 chr3:113679614-113679615(+) m6A 3'UTR//exon//intron       22608085 chr3:113679672-113679673(+) m6A 3'UTR//exon//intron       24284625//24981863//22608085 chr3:113679683-113679684(+) m6A 3'UTR//exon//intron       24284625//24981863//22608085 chr3:113679703-113679704(+) m6A 3'UTR//exon//intron       24284625//24981863//22608085 chr3:113679773-113679774(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//22608085 chr3:113679857-113679858(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//22608085 chr3:113679933-113679934(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr3:113680005-113680006(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr3:113680050-113680051(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr3:113680062-113680063(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr3:113680111-113680112(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr3:113680184-113680185(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr3:113680205-113680206(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr3:113680345-113680346(+) m6A 3'UTR//exon//intron       24284625//24209618//24981863//22608085 chr3:113680419-113680420(+) m6A 3'UTR//exon//intron       24284625//24209618//24981863//22608085 chr3:113681551-113681552(+) m6A 3'UTR//exon//intron       - chr3:113681561-113681562(+) m6A 3'UTR//exon//intron       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZDHHC23	Chromatin K562 cells     - Exosome Blood     - Nucleus Colon cancer cells     24393600 Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H4-5p
Interactor2: ZDHHC23

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg