Basic Information:

  VIRBase ID:  

VHID00160364

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H4-5p:  MIMAT0010203          WDR36:  NM_139281     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H4-5p	WDR36
miRBase Accession/Entrez ID	MIMAT0010203	134430
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	GLC1G//TA-WDRP//TAWDRP//UTP21

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	WDR36	chr5:110463285(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	WDR36	chr5:110451728(+) T-C intron -    22484847 chr5:110462864(+) T-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	WDR36	chr5:110428070-110428071(+) m6A 5'UTR//CDS//exon       24284625//25456834//22608085 chr5:110428083-110428084(+) m6A 5'UTR//CDS//exon       24284625//25456834//22608085 chr5:110428096-110428097(+) m6A 5'UTR//CDS//exon       24284625//25456834//22608085 chr5:110428120-110428121(+) m6A 5'UTR//CDS//exon       24284625//25456834//24981863//22608085 chr5:110428216-110428217(+) m6A CDS//exon       25456834 chr5:110462507-110462508(+) m6A CDS       24981863//22608085 chr5:110462512-110462513(+) m6A CDS       24981863//22608085 chr5:110462599-110462600(+) m6A 3'UTR       24209618//24981863//22608085 chr5:110462605-110462606(+) m6A 3'UTR       24209618//24981863//22608085 chr5:110462632-110462633(+) m6A 3'UTR       24209618//24981863//22608085 chr5:110463142-110463143(+) Y 3'UTR       26075521 chr5:110463409-110463410(+) Y 3'UTR       26075521

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	WDR36	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Membrane HCC cell line (HepG2)|K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H4-5p
Interactor2: WDR36

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg