Basic Information:

  VIRBase ID:  

VHID00160297

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H4-5p:  MIMAT0010203          RAB39B:  NM_171998     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H4-5p	RAB39B
miRBase Accession/Entrez ID	MIMAT0010203	116442
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BGMR//MRX72//WSMN//WSN

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RAB39B	chrX:154488042-154488043(-) Y 3'UTR       26075521 chrX:154489756-154489757(-) m6A 3'UTR       - chrX:154489761-154489762(-) m6A 3'UTR       - chrX:154489773-154489774(-) m6A 3'UTR       25456834 chrX:154489819-154489820(-) m6A 3'UTR       25456834//22608085 chrX:154489900-154489901(-) m6A 3'UTR       25456834//24981863//27773535//27371828//22608085 chrX:154489946-154489947(-) m6A 3'UTR       25456834//24981863//27773535//27371828//22608085 chrX:154489956-154489957(-) m6A 3'UTR       25456834//24981863//27773535//27371828//22608085 chrX:154490001-154490002(-) m6A 3'UTR       25456834//24981863//27773535//27371828//22608085 chrX:154490048-154490049(-) m6A 3'UTR       25456834//27773535//22608085 chrX:154490066-154490067(-) m6A 3'UTR       25456834//27773535//22608085 chrX:154490220-154490221(-) m6A CDS       24981863//27773535//22608085 chrX:154490232-154490233(-) m6A CDS       24981863//27773535//22608085 chrX:154490309-154490310(-) m6A CDS       24981863//27773535//22608085 chrX:154490410-154490411(-) m6A CDS       24981863//27773535//22608085 chrX:154490487-154490488(-) m6A CDS       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RAB39B	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H4-5p
Interactor2: RAB39B

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg