Basic Information:

  VIRBase ID:  

VHID00160288

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H4-5p:  MIMAT0010203          KCTD12:  NM_138444     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H4-5p	KCTD12
miRBase Accession/Entrez ID	MIMAT0010203	115207
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C13orf2//PFET1//PFETIN

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	KCTD12	chr13:77455904-77455905(-) m6A 3'UTR       22608085 chr13:77455911-77455912(-) m6A 3'UTR       22608085 chr13:77455971-77455972(-) m6A 3'UTR       22608085 chr13:77455998-77455999(-) m6A 3'UTR       24981863//22608085 chr13:77456021-77456022(-) m6A 3'UTR       24981863//22608085 chr13:77456035-77456036(-) m6A 3'UTR       24981863//22608085 chr13:77456466-77456467(-) m6A 3'UTR       24981863//22608085 chr13:77456488-77456489(-) m6A 3'UTR       24981863//22608085 chr13:77456573-77456574(-) m6A 3'UTR       24981863//22608085 chr13:77456586-77456587(-) m6A 3'UTR       24981863//22608085 chr13:77456638-77456639(-) m6A 3'UTR       24981863//22608085 chr13:77456713-77456714(-) m6A 3'UTR       24981863//22608085 chr13:77456723-77456724(-) m6A 3'UTR       24981863//22608085 chr13:77456733-77456734(-) m6A 3'UTR       24981863//22608085 chr13:77456828-77456829(-) m6A 3'UTR       22608085 chr13:77456878-77456879(-) m6A 3'UTR       22608085 chr13:77458169-77458170(-) m6A 3'UTR       - chr13:77458257-77458258(-) m6A 3'UTR       24981863 chr13:77458321-77458322(-) m6A 3'UTR       24981863//22608085 chr13:77458340-77458341(-) m6A 3'UTR       25456834//24981863//27371828//22608085 chr13:77458596-77458597(-) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr13:77458649-77458650(-) m6A 3'UTR       24284625//24981863//22575960//22608085 chr13:77458702-77458703(-) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr13:77458729-77458730(-) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr13:77458921-77458922(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr13:77458931-77458932(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27371828//22575960//22608085 chr13:77458957-77458958(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085 chr13:77459015-77459016(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr13:77459069-77459070(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr13:77459079-77459080(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr13:77459088-77459089(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr13:77459097-77459098(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr13:77459139-77459140(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr13:77459170-77459171(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr13:77459295-77459296(-) m6A 3'UTR       24284625//24209618//24981863//27371828//27773536//22575960//22608085 chr13:77459340-77459341(-) m6A CDS       24284625//24209618//24981863//27371828//27773536//22575960//22608085 chr13:77459351-77459352(-) m6A CDS       24284625//24209618//24981863//27371828//27773536//22575960//22608085 chr13:77459510-77459511(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr13:77459531-77459532(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr13:77459788-77459789(-) m6A CDS       24209618//27371828//27773536//22575960 chr13:77459990-77459991(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr13:77460035-77460036(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr13:77460059-77460060(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr13:77460269-77460270(-) m6A CDS       24284625//27371828//27773536//22575960//22608085 chr13:77460496-77460497(-) m6A 5'UTR       24981863//27371828//27773536//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	KCTD12	Cytosol HeLa-S3 cells     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H4-5p
Interactor2: KCTD12

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg