Basic Information:

  VIRBase ID:  

VHID00160248

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H4-5p:  MIMAT0010203          SMDT1:  NR_146715     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H4-5p	SMDT1
miRBase Accession/Entrez ID	MIMAT0010203	91689
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C22orf32//DDDD//EMRE

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SMDT1	chr22:42478467(+) A-I      intronic chr22:42478230(+) A-I      intronic chr22:42478410(+) A-I      intronic chr22:42478427(+) A-I      intronic chr22:42478444(+) A-I      intronic chr22:42478280(+) A-I      intronic chr22:42478388(+) A-I      intronic chr22:42478405(+) A-I      intronic chr22:42477327(+) A-I      intronic chr22:42478335(+) A-I      intronic chr22:42478306(+) A-I      intronic chr22:42478452(+) A-I      intronic chr22:42478345(+) A-I      intronic chr22:42478299(+) A-I      intronic chr22:42478466(+) A-I      intronic

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SMDT1	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Ribosome-free cytosol Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H4-5p
Interactor2: SMDT1

Evidence Support:

Prediction-Evidence	cRep//miRanda//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg