Basic Information:

  VIRBase ID:  

VHID00159555

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H4-5p:  MIMAT0010203          RBM15B:  NM_013286     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H4-5p	RBM15B
miRBase Accession/Entrez ID	MIMAT0010203	29890
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HsOTT3//HUMAGCGB//OTT3

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RBM15B	chr3:51428797-51428798(+) m6A 5'UTR       24209618//25456834//24981863//22575960 chr3:51428852-51428853(+) m6A CDS       24209618//25456834//24981863//22575960 chr3:51428997-51428998(+) m6A CDS       24209618 chr3:51429134-51429135(+) m6A CDS       24209618 chr3:51429299-51429300(+) m6A CDS       24284625 chr3:51429720-51429721(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr3:51429743-51429744(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr3:51429806-51429807(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr3:51429863-51429864(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr3:51429986-51429987(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr3:51429992-51429993(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:51430107-51430108(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:51430165-51430166(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:51430269-51430270(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:51430274-51430275(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:51430312-51430313(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:51430418-51430419(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:51430448-51430449(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:51430454-51430455(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:51430459-51430460(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:51430475-51430476(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:51430480-51430481(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:51430511-51430512(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:51430577-51430578(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:51430645-51430646(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:51430678-51430679(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27371828//22575960//22608085 chr3:51430745-51430746(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr3:51430762-51430763(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr3:51430800-51430801(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr3:51430850-51430851(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr3:51430877-51430878(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr3:51430897-51430898(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr3:51430935-51430936(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr3:51430942-51430943(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr3:51430978-51430979(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr3:51431018-51431019(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr3:51431057-51431058(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr3:51431087-51431088(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr3:51431144-51431145(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr3:51431297-51431298(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr3:51431316-51431317(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr3:51431443-51431444(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:51431466-51431467(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:51431492-51431493(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr3:51431655-51431656(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr3:51431802-51431803(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr3:51431828-51431829(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr3:51431875-51431876(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr3:51431974-51431975(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr3:51432134-51432135(+) m6A 3'UTR       24284625//24981863//22608085 chr3:51432185-51432186(+) m6A 3'UTR       24284625 chr3:51432363-51432364(+) m6A 3'UTR       24284625 chr3:51432450-51432451(+) m6A 3'UTR       24284625 chr3:51432939-51432940(+) m6A 3'UTR       24981863 chr3:51432987-51432988(+) m6A 3'UTR       24284625//24981863 chr3:51432994-51432995(+) m6A 3'UTR       24284625 chr3:51433015-51433016(+) m6A 3'UTR       24284625 chr3:51433060-51433061(+) m6A 3'UTR       24284625 chr3:51433298-51433299(+) m6A 3'UTR       27773535 chr3:51433398-51433399(+) m6A 3'UTR       27773535 chr3:51433435-51433436(+) m6A 3'UTR       27773535 chr3:51433547-51433548(+) m6A 3'UTR       27773535 chr3:51433595-51433596(+) m6A 3'UTR       27773535 chr3:51433630-51433631(+) m6A 3'UTR       27773535 chr3:51433635-51433636(+) m6A 3'UTR       27773535 chr3:51433650-51433651(+) m6A 3'UTR       27773535 chr3:51433677-51433678(+) m6A 3'UTR       24981863//27773535 chr3:51433741-51433742(+) m6A 3'UTR       24284625//27773535 chr3:51433848-51433849(+) m6A 3'UTR       - chr3:51433915-51433916(+) m6A 3'UTR       - chr3:51434603-51434604(+) m6A 3'UTR       27773535 chr3:51434645-51434646(+) m6A 3'UTR       27773535//22608085 chr3:51434677-51434678(+) m6A 3'UTR       24981863//22608085 chr3:51434857-51434858(+) m6A 3'UTR       24981863 chr3:51434936-51434937(+) m6A 3'UTR       24981863 chr3:51435004-51435005(+) m6A 3'UTR       24284625//24981863 chr3:51435035-51435036(+) m6A 3'UTR       24284625//24981863 chr3:51435075-51435076(+) m6A 3'UTR       24981863 chr3:51435114-51435115(+) m6A 3'UTR       24981863//22608085 chr3:51435165-51435166(+) m6A 3'UTR       24981863//22608085 chr3:51435231-51435232(+) m6A 3'UTR       24981863//22608085 chr3:51435273-51435274(+) m6A 3'UTR       24981863//22608085 chr3:51435279-51435280(+) m6A 3'UTR       24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RBM15B	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleolus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H4-5p
Interactor2: RBM15B

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg