Basic Information:

  VIRBase ID:  

VHID00159325

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H4-5p:  MIMAT0010203          MLXIP:  NM_014938     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H4-5p	MLXIP
miRBase Accession/Entrez ID	MIMAT0010203	22877
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	bHLHe36//MIR//MONDOA

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MLXIP	chr12:122598718(+) A-I      intronic chr12:122629257(+) A-I      3'UTR chr12:122629256(+) A-I      3'UTR chr12:122629247(+) A-I      3'UTR chr12:122629213(+) A-I      3'UTR chr12:122592768(+) A-I      intronic chr12:122592754(+) A-I      intronic chr12:122592759(+) A-I      intronic chr12:122592756(+) A-I      intronic chr12:122592755(+) A-I      intronic chr12:122597838(+) A-I      intronic chr12:122528192(+) A-I      intronic chr12:122527073(+) A-I      intronic chr12:122595413(+) A-I      intronic chr12:122587574(+) A-I      intronic chr12:122582003(+) A-I      intronic chr12:122581997(+) A-I      intronic chr12:122523366(+) A-I      intronic chr12:122521572(+) A-I      intronic chr12:122519526(+) A-I      intronic chr12:122581986(+) A-I      intronic chr12:122580764(+) A-I      intronic chr12:122580742(+) A-I      intronic chr12:122528335(+) A-I      intronic chr12:122607036(+) A-I      intronic chr12:122604833(+) A-I      intronic chr12:122530073(+) A-I      intronic chr12:122604019(+) A-I      intronic chr12:122603995(+) A-I      intronic chr12:122603994(+) A-I      intronic chr12:122528206(+) A-I      intronic chr12:122597927(+) A-I      intronic chr12:122597914(+) A-I      intronic chr12:122582046(+) A-I      intronic chr12:122594758(+) A-I      intronic chr12:122594790(+) A-I      intronic chr12:122603137(+) A-I      intronic chr12:122621608(+) A-I      intronic chr12:122608386(+) A-I      intronic chr12:122600022(+) A-I      intronic chr12:122597860(+) A-I      intronic chr12:122599976(+) A-I      intronic chr12:122629177(+) A-I      3'UTR chr12:122530279(+) A-I      intronic chr12:122597855(+) A-I      intronic chr12:122520750(+) A-I      intronic chr12:122530233(+) A-I      intronic chr12:122607301(+) A-I      intronic chr12:122603616(+) A-I      intronic chr12:122529394(+) A-I      intronic chr12:122520989(+) A-I      intronic chr12:122608380(+) A-I      intronic chr12:122616731(+) A-I      intronic chr12:122597830(+) A-I      intronic chr12:122618842(+) A-I      intronic chr12:122596998(+) A-I      intronic chr12:122621097(+) A-I      intronic chr12:122599970(+) A-I      intronic chr12:122581987(+) A-I      intronic chr12:122593777(+) A-I      intronic chr12:122529371(+) A-I      intronic chr12:122528342(+) A-I      intronic chr12:122583763(+) A-I      intronic chr12:122582060(+) A-I      intronic chr12:122521450(+) A-I      intronic chr12:122594767(+) A-I      intronic chr12:122526834(+) A-I      intronic chr12:122599977(+) A-I      intronic chr12:122599324(+) A-I      intronic chr12:122592795(+) A-I      intronic chr12:122621101(+) A-I      intronic chr12:122519473(+) A-I      intronic chr12:122529340(+) A-I      intronic chr12:122529348(+) A-I      intronic chr12:122530243(+) A-I      intronic chr12:122592821(+) A-I      intronic chr12:122520796(+) A-I      intronic chr12:122587232(+) A-I      intronic chr12:122604903(+) A-I      intronic chr12:122526968(+) A-I      intronic chr12:122602640(+) A-I      intronic chr12:122609323(+) A-I      intronic chr12:122592840(+) A-I      intronic chr12:122629178(+) A-I      3'UTR chr12:122628947(+) A-I      3'UTR chr12:122629003(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	MLXIP	chr12:122583806(+) C-A intron -    22484847 chr12:122597830(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MLXIP	chr12:122516859-122516860(+) m6A CDS       24209618 chr12:122615408-122615409(+) m6A CDS//exon       24284625 chr12:122615424-122615425(+) m6A CDS//exon       24284625//22575960 chr12:122615450-122615451(+) m6A CDS//exon       24284625//22575960 chr12:122615459-122615460(+) m6A CDS//exon       24284625//22575960 chr12:122617131-122617132(+) m6A 5'UTR//intron       24284625//24209618//24981863 chr12:122618001-122618002(+) m6A CDS//exon       24284625//24209618//25456834//24981863 chr12:122618014-122618015(+) m6A CDS//exon       24284625//24209618//25456834//24981863 chr12:122618021-122618022(+) m6A CDS//exon       24284625//24209618//25456834//24981863 chr12:122618042-122618043(+) m6A CDS//exon       24284625//24209618//25456834//24981863 chr12:122618183-122618184(+) m6A CDS//exon       24284625//24209618//24981863 chr12:122618427-122618428(+) m6A CDS//exon       24284625 chr12:122618487-122618488(+) m6A CDS//exon       24284625 chr12:122618551-122618552(+) m6A CDS//exon//intron       24284625 chr12:122618610-122618611(+) m6A CDS//exon//intron       24284625 chr12:122622021-122622022(+) m6A CDS//exon       - chr12:122622030-122622031(+) m6A CDS//exon       - chr12:122622090-122622091(+) m6A CDS//exon       - chr12:122622741-122622742(+) m6A CDS//exon       - chr12:122625597-122625598(+) m6A CDS       24284625 chr12:122626288-122626289(+) m6A CDS       24284625 chr12:122626397-122626398(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960 chr12:122626560-122626561(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr12:122626574-122626575(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr12:122626890-122626891(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:122626962-122626963(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:122626992-122626993(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:122627001-122627002(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:122627003-122627004(+) Cm 3'UTR       - chr12:122627111-122627112(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:122627228-122627229(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:122627258-122627259(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:122627319-122627320(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:122627325-122627326(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:122627336-122627337(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:122627391-122627392(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr12:122627460-122627461(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr12:122628057-122628058(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22608085 chr12:122628156-122628157(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22608085 chr12:122628268-122628269(+) m6A 3'UTR       24284625//24209618//24981863 chr12:122628589-122628590(+) Y 3'UTR       26075521 chr12:122629354-122629355(+) m6A 3'UTR       24981863 chr12:122629423-122629424(+) m6A 3'UTR       24981863 chr12:122629475-122629476(+) m6A 3'UTR       24981863 chr12:122630866-122630867(+) m6A 3'UTR       24284625 chr12:122630889-122630890(+) m6A 3'UTR       24284625 chr12:122630911-122630912(+) m6A 3'UTR       24284625 chr12:122630974-122630975(+) m6A 3'UTR       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MLXIP	Chromatin K562 cells     - Cytosol HeLa-S3 cells|K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H4-5p
Interactor2: MLXIP

Evidence Support:

Prediction-Evidence	miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg