Detail Information

Basic Information:


  VIRBase ID:  

VHID00159131

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H4-5p:           KLHL21:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H4-5p KLHL21
miRBase
Accession/Entrez ID		 MIMAT0010203 9903
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR KLHL21
chr1:6667450(-) A-I      intronic
chr1:6665597(-) A-I      intronic
chr1:6670099(-) A-I      intronic
chr1:6665146(-) A-I      intronic
chr1:6669312(-) A-I      intronic
chr1:6669310(-) A-I      intronic
chr1:6666028(-) A-I      intronic
chr1:6667496(-) A-I      intronic
chr1:6667490(-) A-I      intronic
chr1:6667485(-) A-I      intronic
chr1:6666024(-) A-I      intronic
chr1:6668945(-) A-I      intronic
chr1:6665999(-) A-I      intronic
chr1:6666036(-) A-I      intronic
chr1:6666041(-) A-I      intronic
chr1:6669014(-) A-I      intronic
chr1:6666042(-) A-I      intronic
chr1:6667518(-) A-I      intronic
chr1:6666068(-) A-I      intronic
chr1:6667482(-) A-I      intronic
chr1:6667479(-) A-I      intronic
chr1:6666071(-) A-I      intronic
chr1:6667476(-) A-I      intronic
chr1:6667460(-) A-I      intronic
chr1:6667449(-) A-I      intronic
chr1:6667487(-) A-I      intronic
chr1:6666014(-) A-I      intronic
chr1:6668944(-) A-I      intronic
chr1:6664945(-) A-I      intronic
chr1:6665116(-) A-I      intronic
chr1:6667891(-) A-I      intronic
chr1:6667880(-) A-I      intronic
chr1:6667410(-) A-I      intronic
chr1:6667870(-) A-I      intronic
chr1:6670069(-) A-I      intronic
chr1:6665644(-) A-I      intronic
chr1:6670053(-) A-I      intronic
chr1:6669100(-) A-I      intronic
chr1:6666032(-) A-I      intronic
chr1:6665587(-) A-I      intronic
chr1:6667795(-) A-I      intronic
chr1:6667774(-) A-I      intronic
chr1:6667760(-) A-I      intronic
chr1:6667756(-) A-I      intronic
chr1:6667743(-) A-I      intronic
chr1:6667517(-) A-I      intronic
chr1:6667488(-) A-I      intronic
chr1:6667468(-) A-I      intronic
chr1:6667427(-) A-I      intronic
chr1:6667399(-) A-I      intronic
chr1:6667345(-) A-I      intronic
chr1:6667190(-) A-I      intronic
chr1:6667188(-) A-I      intronic
chr1:6667187(-) A-I      intronic
chr1:6667042(-) A-I      intronic
chr1:6667028(-) A-I      intronic
chr1:6670681(-) A-I      intronic
chr1:6670088(-) A-I      intronic
chr1:6670186(-) A-I      intronic
chr1:6670667(-) A-I      intronic
chr1:6670717(-) A-I      intronic
chr1:6671009(-) A-I      intronic
chr1:6671763(-) A-I      intronic
chr1:6672265(-) A-I      intronic
chr1:6672280(-) A-I      intronic
chr1:6672289(-) A-I      intronic
chr1:6670506(-) A-I      intronic
chr1:6654838(-) A-I      5'UTR
chr1:6654528(-) A-I      5'UTR
chr1:6654846(-) A-I      5'UTR
chr1:6654573(-) A-I      5'UTR
chr1:6654644(-) A-I      5'UTR
chr1:6654654(-) A-I      5'UTR
chr1:6654690(-) A-I      5'UTR
chr1:6667510(-) A-I      intronic
chr1:6666299(-) A-I      intronic
chr1:6671218(-) A-I      intronic
chr1:6671227(-) A-I      intronic
chr1:6665574(-) A-I      intronic
chr1:6666063(-) A-I      intronic
chr1:6667694(-) A-I      intronic
chr1:6666176(-) A-I      intronic
chr1:6667515(-) A-I      intronic
chr1:6664988(-) A-I      intronic
chr1:6668249(-) A-I      intronic
chr1:6672391(-) A-I      intronic
chr1:6666304(-) A-I      intronic
chr1:6670026(-) A-I      intronic
chr1:6672350(-) A-I      intronic
chr1:6666000(-) A-I      intronic
chr1:6665121(-) A-I      intronic
chr1:6669373(-) A-I      intronic
chr1:6671322(-) A-I      intronic
chr1:6664917(-) A-I      intronic
chr1:6665559(-) A-I      intronic
chr1:6670139(-) A-I      intronic
chr1:6664920(-) A-I      intronic
chr1:6671188(-) A-I      intronic
chr1:6666313(-) A-I      intronic
chr1:6667565(-) A-I      intronic
chr1:6666650(-) A-I      intronic
chr1:6671203(-) A-I      intronic
chr1:6669006(-) A-I      intronic
chr1:6668363(-) A-I      intronic
chr1:6667378(-) A-I      intronic
chr1:6670587(-) A-I      intronic
chr1:6654506(-) A-I      5'UTR
chr1:6667846(-) A-I      intronic
chr1:6667151(-) A-I      intronic
chr1:6669393(-) A-I      intronic
chr1:6671329(-) A-I      intronic
chr1:6666072(-) A-I      intronic
chr1:6667007(-) A-I      intronic
chr1:6667078(-) A-I      intronic
chr1:6672386(-) A-I      intronic
chr1:6666366(-) A-I      intronic
chr1:6668395(-) A-I      intronic
chr1:6667792(-) A-I      intronic
chr1:6666599(-) A-I      intronic
chr1:6667507(-) A-I      intronic
chr1:6665186(-) A-I      intronic
chr1:6667560(-) A-I      intronic
chr1:6672390(-) A-I      intronic
chr1:6670714(-) A-I      intronic
chr1:6667160(-) A-I      intronic
chr1:6672429(-) A-I      intronic
chr1:6667069(-) A-I      intronic
chr1:6667564(-) A-I      intronic
chr1:6666291(-) A-I      intronic
chr1:6671760(-) A-I      intronic
chr1:6666334(-) A-I      intronic
chr1:6666415(-) A-I      intronic
chr1:6671529(-) A-I      intronic
chr1:6666583(-) A-I      intronic
chr1:6667796(-) A-I      intronic
chr1:6667772(-) A-I      intronic
chr1:6667587(-) A-I      intronic
chr1:6670693(-) A-I      intronic
chr1:6667766(-) A-I      intronic
chr1:6671528(-) A-I      intronic
chr1:6672392(-) A-I      intronic
chr1:6671718(-) A-I      intronic
chr1:6667472(-) A-I      intronic
chr1:6666422(-) A-I      intronic
chr1:6667412(-) A-I      intronic
chr1:6667896(-) A-I      intronic
chr1:6669023(-) A-I      intronic
chr1:6670169(-) A-I      intronic
chr1:6667413(-) A-I      intronic
chr1:6666684(-) A-I      intronic
chr1:6667509(-) A-I      intronic
chr1:6666175(-) A-I      intronic
chr1:6667733(-) A-I      intronic
chr1:6669287(-) A-I      intronic
chr1:6667799(-) A-I      intronic
chr1:6666557(-) A-I      intronic
chr1:6671658(-) A-I      intronic
chr1:6666568(-) A-I      intronic
chr1:6666648(-) A-I      intronic
chr1:6671178(-) A-I      intronic
chr1:6665988(-) A-I      intronic
chr1:6669283(-) A-I      intronic
chr1:6669332(-) A-I      intronic
chr1:6671648(-) A-I      intronic
chr1:6666997(-) A-I      intronic
chr1:6670103(-) A-I      intronic
chr1:6671213(-) A-I      intronic
chr1:6671021(-) A-I      intronic
chr1:6667639(-) A-I      intronic
chr1:6666196(-) A-I      intronic
chr1:6671516(-) A-I      intronic
chr1:6665110(-) A-I      intronic
chr1:6666947(-) A-I      intronic
chr1:6669020(-) A-I      intronic
chr1:6667123(-) A-I      intronic
chr1:6667171(-) A-I      intronic
chr1:6667010(-) A-I      intronic
chr1:6665655(-) A-I      intronic
chr1:6667373(-) A-I      intronic
chr1:6670100(-) A-I      intronic
chr1:6665043(-) A-I      intronic
chr1:6670570(-) A-I      intronic
chr1:6666076(-) A-I      intronic
chr1:6665528(-) A-I      intronic
chr1:6665008(-) A-I      intronic
chr1:6667037(-) A-I      intronic
chr1:6666385(-) A-I      intronic
chr1:6671607(-) A-I      intronic
chr1:6670192(-) A-I      intronic
chr1:6670059(-) A-I      intronic
chr1:6666920(-) A-I      intronic
chr1:6666644(-) A-I      intronic
chr1:6664967(-) A-I      intronic
chr1:6669064(-) A-I      intronic
chr1:6666609(-) A-I      intronic
chr1:6669997(-) A-I      intronic
chr1:6665138(-) A-I      intronic
chr1:6671323(-) A-I      intronic
chr1:6667383(-) A-I      intronic
chr1:6670114(-) A-I      intronic
chr1:6666574(-) A-I      intronic
chr1:6670098(-) A-I      intronic
chr1:6666287(-) A-I      intronic
chr1:6666951(-) A-I      intronic
chr1:6666435(-) A-I      intronic
chr1:6666104(-) A-I      intronic
chr1:6666407(-) A-I      intronic
chr1:6665569(-) A-I      intronic
chr1:6665133(-) A-I      intronic
chr1:6667065(-) A-I      intronic
chr1:6664977(-) A-I      intronic
chr1:6666649(-) A-I      intronic
chr1:6665633(-) A-I      intronic
chr1:6665591(-) A-I      intronic
chr1:6666421(-) A-I      intronic
chr1:6668216(-) A-I      intronic
chr1:6667392(-) A-I      intronic
chr1:6665109(-) A-I      intronic
chr1:6666340(-) A-I      intronic
chr1:6668262(-) A-I      intronic
chr1:6669003(-) A-I      intronic
chr1:6656337(-) A-I      intronic
chr1:6667803(-) A-I      intronic
chr1:6669295(-) A-I      intronic
chr1:6666619(-) A-I      intronic
chr1:6669099(-) A-I      intronic
chr1:6667713(-) A-I      intronic
chr1:6666565(-) A-I      intronic
chr1:6671127(-) A-I      intronic
chr1:6667903(-) A-I      intronic
chr1:6667808(-) A-I      intronic
chr1:6671139(-) A-I      intronic
chr1:6667033(-) A-I      intronic
chr1:6672388(-) A-I      intronic
chr1:6664898(-) A-I      intronic
chr1:6669139(-) A-I      intronic
chr1:6671613(-) A-I      intronic
chr1:6666239(-) A-I      intronic
chr1:6670737(-) A-I      intronic
chr1:6669983(-) A-I      intronic
chr1:6667586(-) A-I      intronic
chr1:6670690(-) A-I      intronic
chr1:6669333(-) A-I      intronic
chr1:6671282(-) A-I      intronic
chr1:6668943(-) A-I      intronic
chr1:6669145(-) A-I      intronic
chr1:6670160(-) A-I      intronic
chr1:6671688(-) A-I      intronic
chr1:6670191(-) A-I      intronic
chr1:6672381(-) A-I      intronic
chr1:6668993(-) A-I      intronic
chr1:6670703(-) A-I      intronic
chr1:6665598(-) A-I      intronic
chr1:6667080(-) A-I      intronic
chr1:6656364(-) A-I      intronic
chr1:6665023(-) A-I      intronic
chr1:6672351(-) A-I      intronic
chr1:6671670(-) A-I      intronic
chr1:6667082(-) A-I      intronic
chr1:6670515(-) A-I      intronic
chr1:6668982(-) A-I      intronic
chr1:6668419(-) A-I      intronic
chr1:6666622(-) A-I      intronic
chr1:6667736(-) A-I      intronic
chr1:6672467(-) A-I      intronic
chr1:6665111(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED KLHL21
chr1:6658864(-) T-C intron -    22484847
chr1:6660306(-) T-C intron -    22484847
chr1:6660353(-) T-C intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase KLHL21
chr1:6651021-6651022(-) m6A 3'UTR       26404942
chr1:6651053-6651054(-) m6A 3'UTR       24284625//26404942
chr1:6651213-6651214(-) m6A 3'UTR       24284625
chr1:6651257-6651258(-) m6A 3'UTR       24284625
chr1:6651273-6651274(-) m6A 3'UTR       24284625
chr1:6652675-6652676(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22575960//22608085
chr1:6652849-6652850(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:6652857-6652858(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:6652895-6652896(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:6652995-6652996(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr1:6653009-6653010(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr1:6653219-6653220(-) Cm 3'UTR       -
chr1:6653342-6653343(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27371828//27773536//22575960//22608085
chr1:6653443-6653444(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr1:6653470-6653471(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr1:6653491-6653492(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr1:6653522-6653523(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr1:6653574-6653575(-) m6A 3'UTR//5'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr1:6653609-6653610(-) m6A 3'UTR//5'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr1:6653643-6653644(-) m6A 3'UTR//5'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:6655566-6655567(-) m6A CDS//intron       24284625//24209618//27371828//22608085
chr1:6659123-6659124(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr1:6659140-6659141(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr1:6659178-6659179(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr1:6659202-6659203(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr1:6659230-6659231(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr1:6659295-6659296(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr1:6659387-6659388(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr1:6659844-6659845(-) m6A 5'UTR//intron       24284625//24209618//27371828//22575960//22608085
chr1:6661912-6661913(-) m6A CDS//intron       24284625//22575960
chr1:6661987-6661988(-) m6A CDS//intron       24284625//22575960
chr1:6662421-6662422(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr1:6662449-6662450(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr1:6662458-6662459(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr1:6662602-6662603(-) m6A CDS//intron       24284625//24981863//27371828//27773536//22575960//22608085
chr1:6662836-6662837(-) m6A CDS//intron       27371828//27773536//22575960

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate KLHL21
Chromatin K562 cells     -
Cytosol K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H4-5p
Interactor2: KLHL21

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//Rep//Targetscan
Support Database RepTar//VmiReg

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