Basic Information:

  VIRBase ID:  

VHID00159103

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H4-5p:  MIMAT0010203          BCLAF1:  NR_170170     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H4-5p	BCLAF1
miRBase Accession/Entrez ID	MIMAT0010203	9774
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	bK211L9.1//BTF

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	BCLAF1	chr6:136607070(-) A-I      intronic chr6:136585549(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	BCLAF1	chr6:136578085-136578086(-) m6A 3'UTR       27773535 chr6:136580764-136580765(-) m6A 3'UTR//intron       24981863 chr6:136580775-136580776(-) m6A 3'UTR//intron       24981863 chr6:136580780-136580781(-) m6A 3'UTR//intron       24981863 chr6:136580790-136580791(-) m6A 3'UTR//intron       24981863 chr6:136580803-136580804(-) m6A 3'UTR//intron       24981863 chr6:136580852-136580853(-) m6A 3'UTR//intron       24981863 chr6:136582081-136582082(-) m6A 3'UTR//exon//intron       27773535 chr6:136582215-136582216(-) m6A 3'UTR//exon       24981863//28052920//27773535//22608085 chr6:136582421-136582422(-) m6A 3'UTR//CDS//exon       24209618//24981863//28052920//27773535//27371828//22608085 chr6:136582449-136582450(-) m6A 3'UTR//CDS//exon       24209618//24981863//28052920//27773535//27371828//22608085 chr6:136582497-136582498(-) m6A 3'UTR//CDS//exon       24209618//24981863//28052920//27773535//27371828//22608085 chr6:136588223-136588224(-) m6A 3'UTR//CDS//exon//intron       24981863//27773535//27371828//22608085 chr6:136588251-136588252(-) m6A 3'UTR//CDS//exon//intron       24981863//27773535//27371828 chr6:136588267-136588268(-) m6A 3'UTR//CDS//exon//intron       24981863//27773535//27371828 chr6:136589304-136589305(-) m6A 3'UTR//CDS//exon       27773535 chr6:136589361-136589362(-) m6A 3'UTR//CDS//exon       27773535 chr6:136589473-136589474(-) m6A 3'UTR//CDS//exon//intron       24981863//27773535 chr6:136589709-136589710(-) m6A exon//intron       27773535 chr6:136589731-136589732(-) m6A exon//intron       27773535 chr6:136589736-136589737(-) m6A exon//intron       27773535 chr6:136589764-136589765(-) m6A exon//intron       27773535 chr6:136590561-136590562(-) m6A exon//intron       24981863 chr6:136590617-136590618(-) m6A 3'UTR//CDS//exon       24981863//27773535 chr6:136594254-136594255(-) m6A 3'UTR//CDS//exon       27773535 chr6:136596818-136596819(-) m6A 3'UTR//CDS       27773535 chr6:136597142-136597143(-) m6A CDS//intron       24284625//24981863//27773535//22608085 chr6:136597182-136597183(-) m6A CDS//intron       24284625//24981863//27773535//22608085 chr6:136597217-136597218(-) m6A CDS//intron       24284625//24209618//24981863//28052920//27773535//22608085 chr6:136597272-136597273(-) m6A CDS//intron       24284625//24209618//24981863//28052920//27773535//22608085 chr6:136597282-136597283(-) m6A CDS//intron       24284625//24209618//24981863//28052920//27773535//22575960//22608085 chr6:136597357-136597358(-) m6A CDS//intron       24284625//24209618//24981863//28052920//27773535//27371828//22575960//22608085 chr6:136597435-136597436(-) m6A CDS//intron       24284625//24209618//24981863//28052920//27773535//27371828//22575960//22608085 chr6:136597449-136597450(-) m6A CDS//intron       24284625//24209618//24981863//28052920//27773535//27371828//22575960//22608085 chr6:136597489-136597490(-) m6A CDS//intron       24284625//24981863//27773535//27371828//22608085 chr6:136599021-136599022(-) m6A CDS       24284625//27773535//27371828 chr6:136599030-136599031(-) m6A CDS       24284625//27773535//27371828 chr6:136599108-136599109(-) m6A CDS       27773535 chr6:136599442-136599443(-) m6A CDS       24284625//25456834//24981863//28052920//27773535//22608085 chr6:136599460-136599461(-) m6A CDS       24284625//25456834//24981863//28052920//27773535//22608085 chr6:136599502-136599503(-) m6A CDS       24284625//25456834//24981863//28052920//27773535//22608085 chr6:136599526-136599527(-) m6A CDS       24284625//25456834//24981863//28052920//27773535//22608085 chr6:136603756-136603757(-) m6A 5'UTR//exon       24284625 chr6:136610869-136610870(-) m6A 5'UTR//exon       24284625//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	BCLAF1	Chromatin HCC cell line (HepG2)|K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm HCC cell line (HepG2)|K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H4-5p
Interactor2: BCLAF1

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg