Basic Information:

  VIRBase ID:  

VHID00158759

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H4-5p:  MIMAT0010203          CCL5:  NM_002985     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H4-5p	CCL5
miRBase Accession/Entrez ID	MIMAT0010203	6352
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	D17S136E//eoCP//RANTES//SCYA5//SIS-delta//SISd//TCP228

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CCL5	chr17:34199976(-) A-I      intronic chr17:34199978(-) A-I      intronic chr17:34200009(-) A-I      intronic chr17:34206517(-) A-I      intronic chr17:34205218(-) A-I      intronic chr17:34201752(-) A-I      intronic chr17:34200013(-) A-I      intronic chr17:34206511(-) A-I      intronic chr17:34200010(-) A-I      intronic chr17:34199915(-) A-I      intronic chr17:34201501(-) A-I      intronic chr17:34205099(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	CCL5	chr17:34199077(-) A-G exon 3'UTR    21725310

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CCL5	chr17:34198539-34198540(-) m6A 3'UTR       27773535 chr17:34198594-34198595(-) m6A 3'UTR       27773535 chr17:34198772-34198773(-) m6A 3'UTR       26404942 chr17:34199235-34199236(-) m6A 3'UTR       26404942//27773535 chr17:34199357-34199358(-) m6A 3'UTR//CDS       26404942//27773535 chr17:34199363-34199364(-) m6A 3'UTR//CDS       26404942//27773535 chr17:34205633-34205634(-) m6A CDS       27773535 chr17:34207336-34207337(-) m6A 5'UTR//intron       26404942//27773535 chr17:34207347-34207348(-) m6A 5'UTR//intron       26404942 chr17:34207426-34207427(-) m6A 5'UTR//intron       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CCL5	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H4-5p
Interactor2: CCL5

Evidence Support:

Prediction-Evidence	cRep//miRanda
Support Database	RepTar//VmiReg