Basic Information:

  VIRBase ID:  

VHID00157710

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H3:  MIMAT0010202          CNEP1R1:  NR_104042     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H3	CNEP1R1
miRBase Accession/Entrez ID	MIMAT0010202	255919
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C16orf69//NEP1-R1//NEP1R1//TMEM188//TMP125

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CNEP1R1	chr16:50068985(+) A-I      intronic chr16:50066683(+) A-I      intronic chr16:50067687(+) A-I      intronic chr16:50067720(+) A-I      intronic chr16:50067763(+) A-I      intronic chr16:50068768(+) A-I      intronic chr16:50068770(+) A-I      intronic chr16:50066701(+) A-I      intronic chr16:50067740(+) A-I      intronic chr16:50060725(+) A-I      intronic chr16:50069001(+) A-I      intronic chr16:50061499(+) A-I      intronic chr16:50062024(+) A-I      intronic chr16:50066730(+) A-I      intronic chr16:50066734(+) A-I      intronic chr16:50062021(+) A-I      intronic chr16:50066754(+) A-I      intronic chr16:50062133(+) A-I      intronic chr16:50062140(+) A-I      intronic chr16:50067654(+) A-I      intronic chr16:50068653(+) A-I      intronic chr16:50062003(+) A-I      intronic chr16:50061172(+) A-I      intronic chr16:50062061(+) A-I      intronic chr16:50062132(+) A-I      intronic chr16:50062081(+) A-I      intronic chr16:50062055(+) A-I      intronic chr16:50060644(+) A-I      intronic chr16:50060738(+) A-I      intronic chr16:50061298(+) A-I      intronic chr16:50062052(+) A-I      intronic chr16:50061995(+) A-I      intronic chr16:50060796(+) A-I      intronic chr16:50067632(+) A-I      intronic chr16:50061204(+) A-I      intronic chr16:50061943(+) A-I      intronic chr16:50060670(+) A-I      intronic chr16:50061889(+) A-I      intronic chr16:50062008(+) A-I      intronic chr16:50060710(+) A-I      intronic chr16:50068667(+) A-I      intronic chr16:50067520(+) A-I      intronic chr16:50060829(+) A-I      intronic chr16:50061157(+) A-I      intronic chr16:50061565(+) A-I      intronic chr16:50060617(+) A-I      intronic chr16:50062072(+) A-I      intronic chr16:50062034(+) A-I      intronic chr16:50061272(+) A-I      intronic chr16:50061243(+) A-I      intronic chr16:50060721(+) A-I      intronic chr16:50068648(+) A-I      intronic chr16:50067924(+) A-I      intronic chr16:50067519(+) A-I      intronic chr16:50062092(+) A-I      intronic chr16:50060622(+) A-I      intronic chr16:50061449(+) A-I      intronic chr16:50061242(+) A-I      intronic chr16:50061998(+) A-I      intronic chr16:50061899(+) A-I      intronic chr16:50062146(+) A-I      intronic chr16:50068692(+) A-I      intronic chr16:50061494(+) A-I      intronic chr16:50069008(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	CNEP1R1	chr16:50062140(+) A-I intron -    22327324 chr16:50069772(+) A-I intron -    21960545 chr16:50061298(+) A-G intron -    22484847 chr16:50062140(+) A-G intron -    22484847 chr16:50067654(+) A-G intron -    22484847 chr16:50070116(+) C-T intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CNEP1R1	chr16:50059190-50059191(+) m6A 5'UTR//exon       24981863 chr16:50059230-50059231(+) m6A CDS//exon       24981863 chr16:50069335-50069336(+) m6A 3'UTR//CDS       24981863 chr16:50069347-50069348(+) m6A 3'UTR//CDS       24981863 chr16:50069392-50069393(+) m6A 3'UTR       24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CNEP1R1	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Ribosome-free cytosol Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H3
Interactor2: CNEP1R1

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg