Basic Information:

  VIRBase ID:  

VHID00156792

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H3:  MIMAT0010202          TMEM101:  NM_001304813     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H3	TMEM101
miRBase Accession/Entrez ID	MIMAT0010202	84336
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TMEM101	chr17:42088717-42088718(-) m6A 3'UTR       27773535 chr17:42088758-42088759(-) m6A 3'UTR       27773535 chr17:42088868-42088869(-) m6A 3'UTR       24209618//25456834//24981863//27773535//27371828 chr17:42088908-42088909(-) m6A 3'UTR       24209618//24981863//27773535//27371828 chr17:42088964-42088965(-) m6A 3'UTR       24209618//24981863//27773535 chr17:42089324-42089325(-) m6A CDS       25456834//24981863 chr17:42089365-42089366(-) m6A CDS       25456834//24981863 chr17:42092476-42092477(-) m6A 5'UTR       25456834 chr17:42092520-42092521(-) m6A 5'UTR       25456834 chr17:42101063-42101064(-) m6A exon       25456834//27773536//22608085 chr17:42101149-42101150(-) m6A exon       25456834//24981863//27773536//22608085 chr17:42101214-42101215(-) m6A exon       25456834//24981863//27773536//22608085 chr17:42101253-42101254(-) m6A exon       22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TMEM101	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H3
Interactor2: TMEM101

Evidence Support:

Prediction-Evidence	miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg