Detail Information

Basic Information:


  VIRBase ID:  

VHID00156789

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H3:           LZIC:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H3 LZIC
miRBase
Accession/Entrez ID		 MIMAT0010202 84328
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR LZIC
chr1:9987457(-) A-I      intronic
chr1:9987513(-) A-I      intronic
chr1:9988203(-) A-I      intronic
chr1:9988210(-) A-I      intronic
chr1:9988223(-) A-I      intronic
chr1:9988669(-) A-I      intronic
chr1:9988709(-) A-I      intronic
chr1:9988244(-) A-I      intronic
chr1:9988713(-) A-I      intronic
chr1:9987911(-) A-I      intronic
chr1:9987928(-) A-I      intronic
chr1:9987912(-) A-I      intronic
chr1:9987926(-) A-I      intronic
chr1:9997784(-) A-I      intronic
chr1:9988796(-) A-I      intronic
chr1:9987540(-) A-I      intronic
chr1:9987532(-) A-I      intronic
chr1:9988799(-) A-I      intronic
chr1:9985681(-) A-I      intronic
chr1:9997670(-) A-I      intronic
chr1:9987432(-) A-I      intronic
chr1:9987401(-) A-I      intronic
chr1:9985715(-) A-I      intronic
chr1:9985745(-) A-I      intronic
chr1:9985750(-) A-I      intronic
chr1:9987530(-) A-I      intronic
chr1:9987934(-) A-I      intronic
chr1:9987542(-) A-I      intronic
chr1:9987874(-) A-I      intronic
chr1:9988169(-) A-I      intronic
chr1:9988181(-) A-I      intronic
chr1:9988207(-) A-I      intronic
chr1:9988234(-) A-I      intronic
chr1:9988252(-) A-I      intronic
chr1:9988262(-) A-I      intronic
chr1:9988284(-) A-I      intronic
chr1:9988295(-) A-I      intronic
chr1:9988308(-) A-I      intronic
chr1:9988309(-) A-I      intronic
chr1:9988311(-) A-I      intronic
chr1:9988314(-) A-I      intronic
chr1:9988333(-) A-I      intronic
chr1:9988338(-) A-I      intronic
chr1:9988752(-) A-I      intronic
chr1:9988762(-) A-I      intronic
chr1:9988802(-) A-I      intronic
chr1:9988847(-) A-I      intronic
chr1:9988852(-) A-I      intronic
chr1:9988917(-) A-I      intronic
chr1:9988923(-) A-I      intronic
chr1:9993154(-) A-I      intronic
chr1:9993880(-) A-I      intronic
chr1:9993881(-) A-I      intronic
chr1:9993906(-) A-I      intronic
chr1:9997078(-) A-I      intronic
chr1:9997343(-) A-I      intronic
chr1:9997646(-) A-I      intronic
chr1:9997648(-) A-I      intronic
chr1:9997684(-) A-I      intronic
chr1:9997757(-) A-I      intronic
chr1:9997758(-) A-I      intronic
chr1:9997794(-) A-I      intronic
chr1:9997806(-) A-I      intronic
chr1:9997823(-) A-I      intronic
chr1:9997856(-) A-I      intronic
chr1:9998304(-) A-I      intronic
chr1:9999232(-) A-I      intronic
chr1:9999257(-) A-I      intronic
chr1:9999288(-) A-I      intronic
chr1:9999297(-) A-I      intronic
chr1:9999560(-) A-I      intronic
chr1:9999577(-) A-I      intronic
chr1:9999583(-) A-I      intronic
chr1:9987563(-) A-I      intronic
chr1:9987561(-) A-I      intronic
chr1:9987541(-) A-I      intronic
chr1:9987536(-) A-I      intronic
chr1:9987529(-) A-I      intronic
chr1:9987528(-) A-I      intronic
chr1:9987492(-) A-I      intronic
chr1:9987475(-) A-I      intronic
chr1:9987462(-) A-I      intronic
chr1:9987456(-) A-I      intronic
chr1:9987400(-) A-I      intronic
chr1:9987396(-) A-I      intronic
chr1:9987383(-) A-I      intronic
chr1:9985716(-) A-I      intronic
chr1:9984679(-) A-I      intronic
chr1:9984641(-) A-I      intronic
chr1:9984101(-) A-I      intronic
chr1:9984093(-) A-I      intronic
chr1:9983907(-) A-I      intronic
chr1:9997653(-) A-I      intronic
chr1:9987982(-) A-I      intronic
chr1:9987998(-) A-I      intronic
chr1:9988022(-) A-I      intronic
chr1:9988151(-) A-I      intronic
chr1:9988156(-) A-I      intronic
chr1:9987586(-) A-I      intronic
chr1:9987624(-) A-I      intronic
chr1:9987737(-) A-I      intronic
chr1:9987756(-) A-I      intronic
chr1:9987775(-) A-I      intronic
chr1:9987807(-) A-I      intronic
chr1:9987839(-) A-I      intronic
chr1:9987902(-) A-I      intronic
chr1:9987909(-) A-I      intronic
chr1:9987915(-) A-I      intronic
chr1:9987921(-) A-I      intronic
chr1:9987946(-) A-I      intronic
chr1:9987957(-) A-I      intronic
chr1:9987966(-) A-I      intronic
chr1:10000375(-) A-I      intronic
chr1:10002154(-) A-I      intronic
chr1:10002178(-) A-I      intronic
chr1:10000077(-) A-I      intronic
chr1:10000053(-) A-I      intronic
chr1:9990954(-) A-I      intronic
chr1:9985875(-) A-I      intronic
chr1:9987968(-) A-I      intronic
chr1:9990916(-) A-I      intronic
chr1:9987857(-) A-I      intronic
chr1:9985919(-) A-I      intronic
chr1:9987745(-) A-I      intronic
chr1:9998469(-) A-I      intronic
chr1:9987981(-) A-I      intronic
chr1:9997600(-) A-I      intronic
chr1:9988137(-) A-I      intronic
chr1:9996777(-) A-I      intronic
chr1:9988147(-) A-I      intronic
chr1:9988369(-) A-I      intronic
chr1:9991253(-) A-I      intronic
chr1:9984217(-) A-I      intronic
chr1:9987863(-) A-I      intronic
chr1:10000163(-) A-I      intronic
chr1:10000052(-) A-I      intronic
chr1:9988812(-) A-I      intronic
chr1:9997762(-) A-I      intronic
chr1:9987508(-) A-I      intronic
chr1:9988692(-) A-I      intronic
chr1:9988020(-) A-I      intronic
chr1:9997660(-) A-I      intronic
chr1:9984687(-) A-I      intronic
chr1:9985126(-) A-I      intronic
chr1:9988324(-) A-I      intronic
chr1:9998423(-) A-I      intronic
chr1:9984590(-) A-I      intronic
chr1:9987990(-) A-I      intronic
chr1:9987534(-) A-I      intronic
chr1:9988271(-) A-I      intronic
chr1:10000130(-) A-I      intronic
chr1:9987949(-) A-I      intronic
chr1:9999654(-) A-I      intronic
chr1:9988834(-) A-I      intronic
chr1:9987771(-) A-I      intronic
chr1:9987850(-) A-I      intronic
chr1:9999298(-) A-I      intronic
chr1:9987777(-) A-I      intronic
chr1:9987480(-) A-I      intronic
chr1:9987827(-) A-I      intronic
chr1:9988190(-) A-I      intronic
chr1:9988205(-) A-I      intronic
chr1:9987848(-) A-I      intronic
chr1:9999691(-) A-I      intronic
chr1:9987535(-) A-I      intronic
chr1:9987951(-) A-I      intronic
chr1:9999315(-) A-I      intronic
chr1:9987445(-) A-I      intronic
chr1:9989620(-) A-I      3'UTR
chr1:9987814(-) A-I      intronic
chr1:9988113(-) A-I      intronic
chr1:9997065(-) A-I      intronic
chr1:10000090(-) A-I      intronic
chr1:9987573(-) A-I      intronic
chr1:9994074(-) A-I      intronic
chr1:9988232(-) A-I      intronic
chr1:9987431(-) A-I      intronic
chr1:9987960(-) A-I      intronic
chr1:9999202(-) A-I      intronic
chr1:10000082(-) A-I      intronic
chr1:9983948(-) A-I      intronic
chr1:9987640(-) A-I      intronic
chr1:9986156(-) A-I      intronic
chr1:9984756(-) A-I      intronic
chr1:9988138(-) A-I      intronic
chr1:9988289(-) A-I      intronic
chr1:9988877(-) A-I      intronic
chr1:9987422(-) A-I      intronic
chr1:9987524(-) A-I      intronic
chr1:9999920(-) A-I      intronic
chr1:9987578(-) A-I      intronic
chr1:9998333(-) A-I      intronic
chr1:9984646(-) A-I      intronic
chr1:10000265(-) A-I      intronic
chr1:9986210(-) A-I      intronic
chr1:9997195(-) A-I      intronic
chr1:9996830(-) A-I      intronic
chr1:9987906(-) A-I      intronic
chr1:9988718(-) A-I      intronic
chr1:9999233(-) A-I      intronic
chr1:9996933(-) A-I      intronic
chr1:9988249(-) A-I      intronic
chr1:9988739(-) A-I      intronic
chr1:9985111(-) A-I      intronic
chr1:9998494(-) A-I      intronic
chr1:9988168(-) A-I      intronic
chr1:9987538(-) A-I      intronic
chr1:9985370(-) A-I      intronic
chr1:9988825(-) A-I      intronic
chr1:9987576(-) A-I      intronic
chr1:9988690(-) A-I      intronic
chr1:9998238(-) A-I      intronic
chr1:9988826(-) A-I      intronic
chr1:9987937(-) A-I      intronic
chr1:9999299(-) A-I      intronic
chr1:9987527(-) A-I      intronic
chr1:9988905(-) A-I      intronic
chr1:9992245(-) A-I      intronic
chr1:9987611(-) A-I      intronic
chr1:9988878(-) A-I      intronic
chr1:9988111(-) A-I      intronic
chr1:9988851(-) A-I      intronic
chr1:9988749(-) A-I      intronic
chr1:9987623(-) A-I      intronic
chr1:9997843(-) A-I      intronic
chr1:9998350(-) A-I      intronic
chr1:9987443(-) A-I      intronic
chr1:9985332(-) A-I      intronic
chr1:9999959(-) A-I      intronic
chr1:9987898(-) A-I      intronic
chr1:9987844(-) A-I      intronic
chr1:9988345(-) A-I      intronic
chr1:9988004(-) A-I      intronic
chr1:9987831(-) A-I      intronic
chr1:9999016(-) A-I      intronic
chr1:9987615(-) A-I      intronic
chr1:9988728(-) A-I      intronic
chr1:9988259(-) A-I      intronic
chr1:9984235(-) A-I      intronic
chr1:9988790(-) A-I      intronic
chr1:9999259(-) A-I      intronic
chr1:9987932(-) A-I      intronic
chr1:9987636(-) A-I      intronic
chr1:9998273(-) A-I      intronic
chr1:9988095(-) A-I      intronic
chr1:9987468(-) A-I      intronic
chr1:9988911(-) A-I      intronic
chr1:9996779(-) A-I      intronic
chr1:9988764(-) A-I      intronic
chr1:9988107(-) A-I      intronic
chr1:9988708(-) A-I      intronic
chr1:9996854(-) A-I      intronic
chr1:9987825(-) A-I      intronic
chr1:9988691(-) A-I      intronic
chr1:9988248(-) A-I      intronic
chr1:9987533(-) A-I      intronic
chr1:9987537(-) A-I      intronic
chr1:9999576(-) A-I      intronic
chr1:9988003(-) A-I      intronic
chr1:9984082(-) A-I      intronic
chr1:9988858(-) A-I      intronic
chr1:9987880(-) A-I      intronic
chr1:9988822(-) A-I      intronic
chr1:9987847(-) A-I      intronic
chr1:9984596(-) A-I      intronic
chr1:9984617(-) A-I      intronic
chr1:9986222(-) A-I      intronic
chr1:9999699(-) A-I      intronic
chr1:9988760(-) A-I      intronic
chr1:9990890(-) A-I      intronic
chr1:9987648(-) A-I      intronic
chr1:9994226(-) A-I      intronic
chr1:9987861(-) A-I      intronic
chr1:9988766(-) A-I      intronic
chr1:9987590(-) A-I      intronic
chr1:9987553(-) A-I      intronic
chr1:9987377(-) A-I      intronic
chr1:9999293(-) A-I      intronic
chr1:10000011(-) A-I      intronic
chr1:9988130(-) A-I      intronic
chr1:9987936(-) A-I      intronic
chr1:10000101(-) A-I      intronic
chr1:9988332(-) A-I      intronic
chr1:9987809(-) A-I      intronic
chr1:9999313(-) A-I      intronic
chr1:9987995(-) A-I      intronic
chr1:9987436(-) A-I      intronic
chr1:10000009(-) A-I      intronic
chr1:9988010(-) A-I      intronic
chr1:9984551(-) A-I      intronic
chr1:9987896(-) A-I      intronic
chr1:9988849(-) A-I      intronic
chr1:9987412(-) A-I      intronic
chr1:9987890(-) A-I      intronic
chr1:9987484(-) A-I      intronic
chr1:10002194(-) A-I      intronic
chr1:9994127(-) A-I      intronic
chr1:9988097(-) A-I      intronic
chr1:9997207(-) A-I      intronic
chr1:9987965(-) A-I      intronic
chr1:9987470(-) A-I      intronic
chr1:9990952(-) A-I      intronic
chr1:9988288(-) A-I      intronic
chr1:9990889(-) A-I      intronic
chr1:9987853(-) A-I      intronic
chr1:9999536(-) A-I      intronic
chr1:9987591(-) A-I      intronic
chr1:9988357(-) A-I      intronic
chr1:9986886(-) A-I      intronic
chr1:9985272(-) A-I      intronic
chr1:9987448(-) A-I      intronic
chr1:9987520(-) A-I      intronic
chr1:9987631(-) A-I      intronic
chr1:9991459(-) A-I      intronic
chr1:9999287(-) A-I      intronic
chr1:9987488(-) A-I      intronic
chr1:9987952(-) A-I      intronic
chr1:9988919(-) A-I      intronic
chr1:9998441(-) A-I      intronic
chr1:9987870(-) A-I      intronic
chr1:9987838(-) A-I      intronic
chr1:9988885(-) A-I      intronic
chr1:9999942(-) A-I      intronic
chr1:9997820(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED LZIC
chr1:9996777(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase LZIC
chr1:10002684-10002685(-) m6A 5'UTR       24981863//27773535
chr1:10002703-10002704(-) Gm 5'UTR       -
chr1:10002721-10002722(-) m6A 5'UTR       24981863//27773535
chr1:10002744-10002745(-) m6A 5'UTR       24981863//27773535
chr1:10002815-10002816(-) m6A 5'UTR       24981863//27773535
chr1:10003374-10003375(-) m6A 5'UTR//intron       24981863
chr1:10003382-10003383(-) m6A 5'UTR//intron       24981863
chr1:9982274-9982275(-) m6A 3'UTR       27773535
chr1:9982319-9982320(-) m6A CDS       27773535
chr1:9982382-9982383(-) m6A CDS       27773535
chr1:9982394-9982395(-) m6A CDS       27773535
chr1:9989147-9989148(-) m6A 3'UTR//intron       27773535
chr1:9989191-9989192(-) m6A 3'UTR//intron       27773535
chr1:9990047-9990048(-) m6A 3'UTR//intron       27773535
chr1:9990068-9990069(-) m6A 3'UTR//intron       24981863//27773535//22608085
chr1:9990175-9990176(-) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22608085
chr1:9990184-9990185(-) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22608085
chr1:9990221-9990222(-) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22608085
chr1:9990230-9990231(-) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22608085
chr1:9990248-9990249(-) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22608085
chr1:9996594-9996595(-) Am CDS       -
chr1:9996611-9996612(-) m6A CDS       24981863//27773535
chr1:9996623-9996624(-) m6A CDS       24981863//27773535
chr1:9996652-9996653(-) m6A CDS       24981863//27773535
chr1:9996658-9996659(-) m6A CDS       24981863//27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate LZIC
Exosome Blood     -
Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H3
Interactor2: LZIC

Evidence Support:


Prediction-Evidence miRanda//PITA
Support Database VmiReg

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