Detail Information

Basic Information:


  VIRBase ID:  

VHID00152508

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H6-5p:           EPHA10:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H6-5p EPHA10
miRBase
Accession/Entrez ID
MIMAT0015281 284656
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR EPHA10
chr1:38198660(-) A-I      intronic
chr1:38198759(-) A-I      intronic
chr1:38214642(-) A-I      intronic
chr1:38217158(-) A-I      intronic
chr1:38199146(-) A-I      intronic
chr1:38205233(-) A-I      intronic
chr1:38198689(-) A-I      intronic
chr1:38225372(-) A-I      intronic
chr1:38214700(-) A-I      intronic
chr1:38220567(-) A-I      intronic
chr1:38211937(-) A-I      intronic
chr1:38198656(-) A-I      intronic
chr1:38198768(-) A-I      intronic
chr1:38225449(-) A-I      intronic
chr1:38205204(-) A-I      intronic
chr1:38205278(-) A-I      intronic
chr1:38198815(-) A-I      intronic
chr1:38205342(-) A-I      intronic
chr1:38198758(-) A-I      intronic
chr1:38200098(-) A-I      intronic
chr1:38213318(-) A-I      intronic
chr1:38200106(-) A-I      intronic
chr1:38211878(-) A-I      intronic
chr1:38214733(-) A-I      intronic
chr1:38198729(-) A-I      intronic
chr1:38198604(-) A-I      intronic
chr1:38225395(-) A-I      intronic
chr1:38205249(-) A-I      intronic
chr1:38206233(-) A-I      intronic
chr1:38220330(-) A-I      intronic
chr1:38222745(-) A-I      intronic
chr1:38199971(-) A-I      intronic
chr1:38220568(-) A-I      intronic
chr1:38205647(-) A-I      intronic
chr1:38220542(-) A-I      intronic
chr1:38220292(-) A-I      intronic
chr1:38198739(-) A-I      intronic
chr1:38198991(-) A-I      intronic
chr1:38214692(-) A-I      intronic
chr1:38200203(-) A-I      intronic
chr1:38205594(-) A-I      intronic
chr1:38226673(-) A-I      3'UTR
chr1:38205520(-) A-I      intronic
chr1:38198661(-) A-I      intronic
chr1:38222771(-) A-I      intronic
chr1:38214732(-) A-I      intronic
chr1:38217301(-) A-I      intronic
chr1:38199090(-) A-I      intronic
chr1:38211846(-) A-I      intronic
chr1:38196406(-) A-I      intronic
chr1:38214884(-) A-I      intronic
chr1:38220763(-) A-I      intronic
chr1:38191134(-) A-I      intronic
chr1:38211845(-) A-I      intronic
chr1:38200130(-) A-I      intronic
chr1:38196426(-) A-I      intronic
chr1:38215326(-) A-I      intronic
chr1:38225428(-) A-I      intronic
chr1:38213002(-) A-I      intronic
chr1:38220286(-) A-I      intronic
chr1:38217482(-) A-I      intronic
chr1:38205644(-) A-I      intronic
chr1:38200097(-) A-I      intronic
chr1:38202891(-) A-I      intronic
chr1:38196637(-) A-I      intronic
chr1:38202027(-) A-I      intronic
chr1:38216452(-) A-I      intronic
chr1:38216491(-) A-I      intronic
chr1:38199963(-) A-I      intronic
chr1:38199147(-) A-I      intronic
chr1:38216416(-) A-I      intronic

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate EPHA10
Exosome Blood     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H6-5p
Interactor2: EPHA10

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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