Basic Information:

  VIRBase ID:  

VHID00152099

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H6-5p:  MIMAT0015281          CD300LG:  NM_001168322     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H6-5p	CD300LG
miRBase Accession/Entrez ID	MIMAT0015281	146894
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CLM-9//CLM9//NEPMUCIN//TREM-4//TREM4

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CD300LG	chr17:41929845(+) A-I      intronic chr17:41927978(+) A-I      intronic chr17:41929844(+) A-I      intronic chr17:41940626(+) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CD300LG	chr17:41939568-41939569(+) m6A 3'UTR       - chr17:41939610-41939611(+) m6A 3'UTR       - chr17:41939637-41939638(+) m6A 3'UTR       - chr17:41939660-41939661(+) m6A 3'UTR       - chr17:41939694-41939695(+) m6A 3'UTR       - chr17:41939752-41939753(+) m6A 3'UTR       - chr17:41939776-41939777(+) m6A 3'UTR       - chr17:41939838-41939839(+) m6A 3'UTR       - chr17:41939848-41939849(+) m6A 3'UTR       - chr17:41939872-41939873(+) m6A 3'UTR       - chr17:41939946-41939947(+) m6A 3'UTR       - chr17:41940040-41940041(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CD300LG	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H6-5p
Interactor2: CD300LG

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg