Basic Information:

  VIRBase ID:  

VHID00151069

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H6-5p:  MIMAT0015281          ZNF747:  NM_001305018     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H6-5p	ZNF747
miRBase Accession/Entrez ID	MIMAT0015281	65988
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZNF747	chr16:30543400(-) A-I      3'UTR chr16:30543416(-) A-I      3'UTR chr16:30543422(-) A-I      3'UTR chr16:30543430(-) A-I      3'UTR chr16:30543029(-) A-I      3'UTR chr16:30542929(-) A-I      3'UTR chr16:30542926(-) A-I      3'UTR chr16:30543025(-) A-I      3'UTR chr16:30542879(-) A-I      3'UTR chr16:30542987(-) A-I      3'UTR chr16:30542989(-) A-I      3'UTR chr16:30543044(-) A-I      3'UTR chr16:30542852(-) A-I      3'UTR chr16:30542865(-) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF747	chr16:30541749-30541750(-) m6A 3'UTR       24284625//24209618//24981863//27773535//27371828 chr16:30541872-30541873(-) m6A 3'UTR       27773535//22608085 chr16:30541981-30541982(-) m6A 3'UTR       25456834//24981863//27773535//22608085 chr16:30541996-30541997(-) m6A 3'UTR       25456834//24981863//27773535//22608085 chr16:30542021-30542022(-) m6A 3'UTR       25456834//24981863//27773535//22608085 chr16:30542066-30542067(-) m6A 3'UTR       24981863//27773535//22608085 chr16:30542336-30542337(-) m6A 3'UTR       27773535 chr16:30543592-30543593(-) m6A 3'UTR       24284625//25456834//27371828//22608085 chr16:30543696-30543697(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr16:30543758-30543759(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr16:30543795-30543796(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr16:30543871-30543872(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr16:30543877-30543878(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr16:30543980-30543981(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr16:30544134-30544135(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr16:30544174-30544175(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr16:30544443-30544444(-) m6A CDS       24284625//25456834//27371828//27773536 chr16:30544459-30544460(-) m6A CDS       24284625//25456834//27371828//27773536 chr16:30545522-30545523(-) m6A CDS       24284625//25456834//27371828//27773536 chr16:30545578-30545579(-) m6A CDS       24284625//25456834//27371828//27773536 chr16:30545795-30545796(-) m6A CDS       27773536 chr16:30545932-30545933(-) m6A CDS       24284625//27773536 chr16:30546142-30546143(-) m6A 5'UTR       24284625//24981863//27371828 chr16:30546165-30546166(-) m6A 5'UTR       25456834//24981863//27371828//22608085 chr16:30546266-30546267(-) m6A 5'UTR       25456834//24981863//22608085 chr16:30546385-30546386(-) m6A 5'UTR       24981863 chr16:30546442-30546443(-) m6A 5'UTR       24284625//24981863//22608085 chr16:30546488-30546489(-) m6A 5'UTR       24284625//24981863//22608085 chr16:30546498-30546499(-) m6A 5'UTR       24284625//24981863//22608085 chr16:30546623-30546624(-) m6A 5'UTR       22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZNF747	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H6-5p
Interactor2: ZNF747

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg