Basic Information:

  VIRBase ID:  

VHID00150711

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H6-5p:  MIMAT0015281          ACKR3:  NM_020311     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H6-5p	ACKR3
miRBase Accession/Entrez ID	MIMAT0015281	57007
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CMKOR1//CXC-R7//CXCR-7//CXCR7//GPR159//RDC-1//RDC1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ACKR3	chr2:237489145-237489146(+) m6A CDS       24209618//24981863//22575960 chr2:237489154-237489155(+) m6A CDS       24209618//24981863//22575960 chr2:237489196-237489197(+) m6A CDS       24284625//24209618//24981863//22575960 chr2:237489327-237489328(+) m6A CDS       24284625//24209618//25456834//24981863//22575960 chr2:237489361-237489362(+) m6A CDS       24284625//24209618//25456834//24981863//22575960 chr2:237489529-237489530(+) m6A CDS       24209618//22575960 chr2:237489931-237489932(+) m6A CDS       24209618 chr2:237490119-237490120(+) m6A CDS       24209618//25456834//24981863//22575960 chr2:237490239-237490240(+) m6A 3'UTR       24209618//25456834//24981863//22575960 chr2:237490450-237490451(+) m6A 3'UTR       24209618//24981863//22575960 chr2:237490464-237490465(+) m6A 3'UTR       24209618//24981863 chr2:237490533-237490534(+) m6A 3'UTR       24209618//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ACKR3	Cytosol HeLa-S3 cells     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H6-5p
Interactor2: ACKR3

Evidence Support:

Prediction-Evidence	cRep//RNAHybrid
Support Database	RepTar//VmiReg