Basic Information:

  VIRBase ID:  

VHID00150708

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H6-5p:  MIMAT0015281          TOMM22:  NM_020243     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H6-5p	TOMM22
miRBase Accession/Entrez ID	MIMAT0015281	56993
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	1C9-2//MST065//MSTP065//TOM22

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TOMM22	chr22:39078018-39078019(+) m6A CDS       25456834//24981863//27371828//27773536 chr22:39078305-39078306(+) m6A exon//intron       24981863 chr22:39078336-39078337(+) m6A CDS//exon       24981863 chr22:39078350-39078351(+) m6A CDS//exon       24981863 chr22:39079903-39079904(+) m6A 3'UTR//exon       24284625//24981863 chr22:39079960-39079961(+) m6A 3'UTR//exon       24284625//24981863//22608085 chr22:39080001-39080002(+) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr22:39080161-39080162(+) m6A 3'UTR//exon       24981863 chr22:39080247-39080248(+) m6A 3'UTR       24981863//26404942//27773535//22608085 chr22:39080265-39080266(+) m6A 3'UTR       24981863//26404942//27773535//22608085 chr22:39080364-39080365(+) m6A 3'UTR       24981863//27773535//22608085 chr22:39080374-39080375(+) m6A 3'UTR       24981863//27773535//22608085 chr22:39080414-39080415(+) m6A 3'UTR       24981863//27773535//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TOMM22	Exosome Blood     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H6-5p
Interactor2: TOMM22

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg