Basic Information:

  VIRBase ID:  

VHID00148875

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H6-5p:  MIMAT0015281          YARS1:  NM_003680     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H6-5p	YARS1
miRBase Accession/Entrez ID	MIMAT0015281	8565
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CMTDIC//TYRRS//YARS//YRS//YTS

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	YARS1	chr1:33263539(-) A-I      intronic chr1:33263600(-) A-I      intronic chr1:33263646(-) A-I      intronic chr1:33263648(-) A-I      intronic chr1:33277886(-) A-I      intronic chr1:33277912(-) A-I      intronic chr1:33277887(-) A-I      intronic chr1:33280184(-) A-I      intronic chr1:33280185(-) A-I      intronic chr1:33280192(-) A-I      intronic chr1:33258292(-) A-I      intronic chr1:33251351(-) A-I      intronic chr1:33251398(-) A-I      intronic chr1:33251401(-) A-I      intronic chr1:33251412(-) A-I      intronic chr1:33254590(-) A-I      intronic chr1:33254594(-) A-I      intronic chr1:33260038(-) A-I      intronic chr1:33260058(-) A-I      intronic chr1:33260072(-) A-I      intronic chr1:33260169(-) A-I      intronic chr1:33262864(-) A-I      intronic chr1:33263501(-) A-I      intronic chr1:33263519(-) A-I      intronic chr1:33242037(-) A-I      intronic chr1:33242398(-) A-I      intronic chr1:33242408(-) A-I      intronic chr1:33242485(-) A-I      intronic chr1:33242508(-) A-I      intronic chr1:33243155(-) A-I      intronic chr1:33243160(-) A-I      intronic chr1:33243166(-) A-I      intronic chr1:33243274(-) A-I      intronic chr1:33243375(-) A-I      intronic chr1:33250844(-) A-I      intronic chr1:33250986(-) A-I      intronic chr1:33251173(-) A-I      intronic chr1:33251312(-) A-I      intronic chr1:33251378(-) A-I      intronic chr1:33251471(-) A-I      intronic chr1:33252807(-) A-I      intronic chr1:33252941(-) A-I      intronic chr1:33253138(-) A-I      intronic chr1:33253255(-) A-I      intronic chr1:33253469(-) A-I      intronic chr1:33253475(-) A-I      intronic chr1:33253494(-) A-I      intronic chr1:33253520(-) A-I      intronic chr1:33253562(-) A-I      intronic chr1:33253567(-) A-I      intronic chr1:33253941(-) A-I      intronic chr1:33254097(-) A-I      intronic chr1:33254124(-) A-I      intronic chr1:33254165(-) A-I      intronic chr1:33254211(-) A-I      intronic chr1:33254327(-) A-I      intronic chr1:33254558(-) A-I      intronic chr1:33254694(-) A-I      intronic chr1:33254699(-) A-I      intronic chr1:33255622(-) A-I      intronic chr1:33255645(-) A-I      intronic chr1:33255649(-) A-I      intronic chr1:33255709(-) A-I      intronic chr1:33255875(-) A-I      intronic chr1:33255880(-) A-I      intronic chr1:33256039(-) A-I      intronic chr1:33256052(-) A-I      intronic chr1:33256063(-) A-I      intronic chr1:33256068(-) A-I      intronic chr1:33256101(-) A-I      intronic chr1:33259721(-) A-I      intronic chr1:33259733(-) A-I      intronic chr1:33259759(-) A-I      intronic chr1:33259802(-) A-I      intronic chr1:33259803(-) A-I      intronic chr1:33259827(-) A-I      intronic chr1:33259907(-) A-I      intronic chr1:33260029(-) A-I      intronic chr1:33260112(-) A-I      intronic chr1:33260128(-) A-I      intronic chr1:33260444(-) A-I      intronic chr1:33260731(-) A-I      intronic chr1:33260782(-) A-I      intronic chr1:33260851(-) A-I      intronic chr1:33261250(-) A-I      intronic chr1:33261263(-) A-I      intronic chr1:33261298(-) A-I      intronic chr1:33261307(-) A-I      intronic chr1:33261360(-) A-I      intronic chr1:33261363(-) A-I      intronic chr1:33261652(-) A-I      intronic chr1:33261682(-) A-I      intronic chr1:33261728(-) A-I      intronic chr1:33261787(-) A-I      intronic chr1:33261978(-) A-I      intronic chr1:33261996(-) A-I      intronic chr1:33262078(-) A-I      intronic chr1:33262135(-) A-I      intronic chr1:33262146(-) A-I      intronic chr1:33262290(-) A-I      intronic chr1:33262343(-) A-I      intronic chr1:33262466(-) A-I      intronic chr1:33262878(-) A-I      intronic chr1:33262911(-) A-I      intronic chr1:33263527(-) A-I      intronic chr1:33263574(-) A-I      intronic chr1:33263583(-) A-I      intronic chr1:33263610(-) A-I      intronic chr1:33263643(-) A-I      intronic chr1:33263644(-) A-I      intronic chr1:33263651(-) A-I      intronic chr1:33264374(-) A-I      intronic chr1:33265996(-) A-I      intronic chr1:33266283(-) A-I      intronic chr1:33266311(-) A-I      intronic chr1:33266379(-) A-I      intronic chr1:33266423(-) A-I      intronic chr1:33268506(-) A-I      intronic chr1:33268512(-) A-I      intronic chr1:33268516(-) A-I      intronic chr1:33268722(-) A-I      intronic chr1:33268775(-) A-I      intronic chr1:33268781(-) A-I      intronic chr1:33268809(-) A-I      intronic chr1:33271480(-) A-I      intronic chr1:33273557(-) A-I      intronic chr1:33273881(-) A-I      intronic chr1:33273886(-) A-I      intronic chr1:33273999(-) A-I      intronic chr1:33274825(-) A-I      intronic chr1:33275535(-) A-I      intronic chr1:33275558(-) A-I      intronic chr1:33275567(-) A-I      intronic chr1:33275595(-) A-I      intronic chr1:33275622(-) A-I      intronic chr1:33275625(-) A-I      intronic chr1:33277840(-) A-I      intronic chr1:33278406(-) A-I      intronic chr1:33279025(-) A-I      intronic chr1:33279058(-) A-I      intronic chr1:33280110(-) A-I      intronic chr1:33280903(-) A-I      intronic chr1:33274723(-) A-I      intronic chr1:33241845(-) A-I      intronic chr1:33241913(-) A-I      intronic chr1:33241926(-) A-I      intronic chr1:33241927(-) A-I      intronic chr1:33241955(-) A-I      intronic chr1:33241994(-) A-I      intronic chr1:33242004(-) A-I      intronic chr1:33242029(-) A-I      intronic chr1:33253295(-) A-I      intronic chr1:33280128(-) A-I      intronic chr1:33278493(-) A-I      intronic chr1:33254528(-) A-I      intronic chr1:33242409(-) A-I      intronic chr1:33280096(-) A-I      intronic chr1:33262096(-) A-I      intronic chr1:33280263(-) A-I      intronic chr1:33262160(-) A-I      intronic chr1:33255570(-) A-I      intronic chr1:33262320(-) A-I      intronic chr1:33255945(-) A-I      intronic chr1:33280210(-) A-I      intronic chr1:33268795(-) A-I      intronic chr1:33253473(-) A-I      intronic chr1:33275533(-) A-I      intronic chr1:33263548(-) A-I      intronic chr1:33259816(-) A-I      intronic chr1:33275624(-) A-I      intronic chr1:33275519(-) A-I      intronic chr1:33274858(-) A-I      intronic chr1:33260076(-) A-I      intronic chr1:33279216(-) A-I      intronic chr1:33264203(-) A-I      intronic chr1:33253275(-) A-I      intronic chr1:33262237(-) A-I      intronic chr1:33279196(-) A-I      intronic chr1:33280160(-) A-I      intronic chr1:33255730(-) A-I      intronic chr1:33252910(-) A-I      intronic chr1:33251048(-) A-I      intronic chr1:33255866(-) A-I      intronic chr1:33264410(-) A-I      intronic chr1:33255547(-) A-I      intronic chr1:33260155(-) A-I      intronic chr1:33250804(-) A-I      intronic chr1:33244082(-) A-I      intronic chr1:33265820(-) A-I      intronic chr1:33260459(-) A-I      intronic chr1:33278431(-) A-I      intronic chr1:33253571(-) A-I      intronic chr1:33280105(-) A-I      intronic chr1:33255328(-) A-I      intronic chr1:33251457(-) A-I      intronic chr1:33253249(-) A-I      intronic chr1:33253474(-) A-I      intronic chr1:33280209(-) A-I      intronic chr1:33242728(-) A-I      intronic chr1:33251249(-) A-I      intronic chr1:33262163(-) A-I      intronic chr1:33260481(-) A-I      intronic chr1:33260145(-) A-I      intronic chr1:33274897(-) A-I      intronic chr1:33243112(-) A-I      intronic chr1:33275607(-) A-I      intronic chr1:33253003(-) A-I      intronic chr1:33254586(-) A-I      intronic chr1:33258247(-) A-I      intronic chr1:33253950(-) A-I      intronic chr1:33253351(-) A-I      intronic chr1:33260548(-) A-I      intronic chr1:33277813(-) A-I      intronic chr1:33255992(-) A-I      intronic chr1:33280019(-) A-I      intronic chr1:33280027(-) A-I      intronic chr1:33260272(-) A-I      intronic chr1:33280233(-) A-I      intronic chr1:33252903(-) A-I      intronic chr1:33250950(-) A-I      intronic chr1:33254170(-) A-I      intronic chr1:33263604(-) A-I      intronic chr1:33268974(-) A-I      intronic chr1:33262931(-) A-I      intronic chr1:33263636(-) A-I      intronic chr1:33279200(-) A-I      intronic chr1:33253439(-) A-I      intronic chr1:33259686(-) A-I      intronic chr1:33253589(-) A-I      intronic chr1:33266455(-) A-I      intronic chr1:33263652(-) A-I      intronic chr1:33260334(-) A-I      intronic chr1:33262873(-) A-I      intronic chr1:33253959(-) A-I      intronic chr1:33262255(-) A-I      intronic chr1:33251388(-) A-I      intronic chr1:33264380(-) A-I      intronic chr1:33280767(-) A-I      intronic chr1:33275063(-) A-I      intronic chr1:33264323(-) A-I      intronic chr1:33252926(-) A-I      intronic chr1:33255359(-) A-I      intronic chr1:33277795(-) A-I      intronic chr1:33243185(-) A-I      intronic chr1:33266463(-) A-I      intronic chr1:33275668(-) A-I      intronic chr1:33254700(-) A-I      intronic chr1:33263669(-) A-I      intronic chr1:33260279(-) A-I      intronic chr1:33259943(-) A-I      intronic chr1:33253671(-) A-I      intronic chr1:33257268(-) A-I      intronic chr1:33253461(-) A-I      intronic chr1:33254602(-) A-I      intronic chr1:33251322(-) A-I      intronic chr1:33265833(-) A-I      intronic chr1:33280747(-) A-I      intronic chr1:33243293(-) A-I      intronic chr1:33253467(-) A-I      intronic chr1:33262716(-) A-I      intronic chr1:33250898(-) A-I      intronic chr1:33280179(-) A-I      intronic chr1:33266006(-) A-I      intronic chr1:33260064(-) A-I      intronic chr1:33253387(-) A-I      intronic chr1:33252921(-) A-I      intronic chr1:33262730(-) A-I      intronic chr1:33262083(-) A-I      intronic chr1:33275559(-) A-I      intronic chr1:33273635(-) A-I      intronic chr1:33242446(-) A-I      intronic chr1:33262932(-) A-I      intronic chr1:33280135(-) A-I      intronic chr1:33264311(-) A-I      intronic chr1:33253555(-) A-I      intronic chr1:33259685(-) A-I      intronic chr1:33251392(-) A-I      intronic chr1:33259829(-) A-I      intronic chr1:33252955(-) A-I      intronic chr1:33254554(-) A-I      intronic chr1:33254304(-) A-I      intronic chr1:33275650(-) A-I      intronic chr1:33279148(-) A-I      intronic chr1:33255552(-) A-I      intronic chr1:33261241(-) A-I      intronic chr1:33244039(-) A-I      intronic chr1:33260149(-) A-I      intronic chr1:33278564(-) A-I      intronic chr1:33268657(-) A-I      intronic chr1:33275585(-) A-I      intronic chr1:33255282(-) A-I      intronic chr1:33251056(-) A-I      intronic chr1:33253599(-) A-I      intronic chr1:33253629(-) A-I      intronic chr1:33253309(-) A-I      intronic chr1:33255258(-) A-I      intronic chr1:33281106(-) A-I      intronic chr1:33260505(-) A-I      intronic chr1:33253549(-) A-I      intronic chr1:33271442(-) A-I      intronic chr1:33278457(-) A-I      intronic chr1:33254171(-) A-I      intronic chr1:33253918(-) A-I      intronic chr1:33253388(-) A-I      intronic chr1:33259894(-) A-I      intronic chr1:33255756(-) A-I      intronic chr1:33251321(-) A-I      intronic chr1:33275088(-) A-I      intronic chr1:33275527(-) A-I      intronic chr1:33273957(-) A-I      intronic chr1:33262259(-) A-I      intronic chr1:33266313(-) A-I      intronic chr1:33261788(-) A-I      intronic chr1:33262236(-) A-I      intronic chr1:33260189(-) A-I      intronic chr1:33273984(-) A-I      intronic chr1:33255633(-) A-I      intronic chr1:33262308(-) A-I      intronic chr1:33259932(-) A-I      intronic chr1:33262807(-) A-I      intronic chr1:33278447(-) A-I      intronic chr1:33254570(-) A-I      intronic chr1:33266024(-) A-I      intronic chr1:33261157(-) A-I      intronic chr1:33250940(-) A-I      intronic chr1:33260115(-) A-I      intronic chr1:33280868(-) A-I      intronic chr1:33262001(-) A-I      intronic chr1:33280258(-) A-I      intronic chr1:33264193(-) A-I      intronic chr1:33262913(-) A-I      intronic chr1:33252869(-) A-I      intronic chr1:33242823(-) A-I      intronic chr1:33262087(-) A-I      intronic chr1:33254678(-) A-I      intronic chr1:33262286(-) A-I      intronic chr1:33253248(-) A-I      intronic chr1:33242742(-) A-I      intronic chr1:33242957(-) A-I      intronic chr1:33263603(-) A-I      intronic chr1:33278993(-) A-I      intronic chr1:33251464(-) A-I      intronic chr1:33250895(-) A-I      intronic chr1:33260352(-) A-I      intronic chr1:33279057(-) A-I      intronic chr1:33254564(-) A-I      intronic chr1:33253628(-) A-I      intronic chr1:33262966(-) A-I      intronic chr1:33253539(-) A-I      intronic chr1:33260184(-) A-I      intronic chr1:33242014(-) A-I      intronic chr1:33260280(-) A-I      intronic chr1:33260114(-) A-I      intronic chr1:33253635(-) A-I      intronic chr1:33274877(-) A-I      intronic chr1:33253611(-) A-I      intronic chr1:33260463(-) A-I      intronic chr1:33241930(-) A-I      intronic chr1:33260131(-) A-I      intronic chr1:33260522(-) A-I      intronic chr1:33260216(-) A-I      intronic chr1:33265520(-) A-I      intronic chr1:33273120(-) A-I      intronic chr1:33280801(-) A-I      intronic chr1:33243009(-) A-I      intronic chr1:33254691(-) A-I      intronic chr1:33255765(-) A-I      intronic chr1:33262756(-) A-I      intronic chr1:33254682(-) A-I      intronic chr1:33242419(-) A-I      intronic chr1:33242400(-) A-I      intronic chr1:33265801(-) A-I      intronic chr1:33277895(-) A-I      intronic chr1:33253546(-) A-I      intronic chr1:33263609(-) A-I      intronic chr1:33260263(-) A-I      intronic chr1:33262865(-) A-I      intronic chr1:33253382(-) A-I      intronic chr1:33280784(-) A-I      intronic chr1:33268716(-) A-I      intronic chr1:33253587(-) A-I      intronic chr1:33257240(-) A-I      intronic chr1:33242418(-) A-I      intronic chr1:33274826(-) A-I      intronic chr1:33260439(-) A-I      intronic chr1:33262890(-) A-I      intronic chr1:33264301(-) A-I      intronic chr1:33242769(-) A-I      intronic chr1:33278403(-) A-I      intronic chr1:33255577(-) A-I      intronic chr1:33261796(-) A-I      intronic chr1:33260173(-) A-I      intronic chr1:33255688(-) A-I      intronic chr1:33243350(-) A-I      intronic chr1:33242322(-) A-I      intronic chr1:33260223(-) A-I      intronic chr1:33262110(-) A-I      intronic chr1:33262399(-) A-I      intronic chr1:33253990(-) A-I      intronic chr1:33242378(-) A-I      intronic chr1:33268851(-) A-I      intronic chr1:33243204(-) A-I      intronic chr1:33260062(-) A-I      intronic chr1:33260088(-) A-I      intronic chr1:33253298(-) A-I      intronic chr1:33242824(-) A-I      intronic chr1:33280307(-) A-I      intronic chr1:33255305(-) A-I      intronic chr1:33265742(-) A-I      intronic chr1:33251344(-) A-I      intronic chr1:33265825(-) A-I      intronic chr1:33255689(-) A-I      intronic chr1:33253563(-) A-I      intronic chr1:33262021(-) A-I      intronic chr1:33279048(-) A-I      intronic chr1:33280190(-) A-I      intronic chr1:33261299(-) A-I      intronic chr1:33243136(-) A-I      intronic chr1:33265975(-) A-I      intronic chr1:33262971(-) A-I      intronic chr1:33254776(-) A-I      intronic chr1:33253983(-) A-I      intronic chr1:33262483(-) A-I      intronic chr1:33280257(-) A-I      intronic chr1:33251299(-) A-I      intronic chr1:33254646(-) A-I      intronic chr1:33275579(-) A-I      intronic chr1:33266069(-) A-I      intronic chr1:33260264(-) A-I      intronic chr1:33280685(-) A-I      intronic chr1:33266370(-) A-I      intronic chr1:33260346(-) A-I      intronic chr1:33251316(-) A-I      intronic chr1:33243100(-) A-I      intronic chr1:33258268(-) A-I      intronic chr1:33280088(-) A-I      intronic chr1:33254305(-) A-I      intronic chr1:33280087(-) A-I      intronic chr1:33271378(-) A-I      intronic chr1:33254161(-) A-I      intronic chr1:33260067(-) A-I      intronic chr1:33275620(-) A-I      intronic chr1:33262159(-) A-I      intronic chr1:33255920(-) A-I      intronic chr1:33243029(-) A-I      intronic chr1:33260879(-) A-I      intronic chr1:33262770(-) A-I      intronic chr1:33253466(-) A-I      intronic chr1:33256002(-) A-I      intronic chr1:33277889(-) A-I      intronic chr1:33254313(-) A-I      intronic chr1:33260135(-) A-I      intronic chr1:33260151(-) A-I      intronic chr1:33264328(-) A-I      intronic chr1:33262728(-) A-I      intronic chr1:33280286(-) A-I      intronic chr1:33274832(-) A-I      intronic chr1:33279022(-) A-I      intronic chr1:33259813(-) A-I      intronic chr1:33253529(-) A-I      intronic chr1:33280052(-) A-I      intronic chr1:33244146(-) A-I      intronic chr1:33251255(-) A-I      intronic chr1:33261814(-) A-I      intronic chr1:33280129(-) A-I      intronic chr1:33273235(-) A-I      intronic chr1:33255953(-) A-I      intronic chr1:33261821(-) A-I      intronic chr1:33244206(-) A-I      intronic chr1:33279040(-) A-I      intronic chr1:33260063(-) A-I      intronic chr1:33259694(-) A-I      intronic chr1:33255553(-) A-I      intronic chr1:33251222(-) A-I      intronic chr1:33280867(-) A-I      intronic

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	YARS1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H6-5p
Interactor2: YARS1

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg