Basic Information:

  VIRBase ID:  

VHID00147114

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H6-5p:  MIMAT0015281          ALDH1B1:  NM_000692     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H6-5p	ALDH1B1
miRBase Accession/Entrez ID	MIMAT0015281	219
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ALDH5//ALDHX

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ALDH1B1	chr9:38392707-38392708(+) m6A 5'UTR       24284625//25456834//24981863//22608085 chr9:38392737-38392738(+) m6A 5'UTR       24284625//25456834//24981863//22608085 chr9:38392757-38392758(+) m6A 5'UTR       24284625//25456834//24981863//22608085 chr9:38392763-38392764(+) m6A 5'UTR       24284625//25456834//24981863//22608085 chr9:38392781-38392782(+) m6A 5'UTR       24284625//25456834//24981863//26404942//22608085 chr9:38394475-38394476(+) m6A 5'UTR//intron       - chr9:38394510-38394511(+) m6A 5'UTR//intron       - chr9:38395790-38395791(+) m6A CDS       24284625//25456834//24981863//26404942//22608085 chr9:38395836-38395837(+) m6A CDS       24284625//24981863//26404942 chr9:38395842-38395843(+) m6A CDS       24284625//24981863//26404942 chr9:38395901-38395902(+) m6A CDS       24284625//24981863//26404942//22575960 chr9:38396061-38396062(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:38396073-38396074(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:38396114-38396115(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:38396121-38396122(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:38396157-38396158(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:38396222-38396223(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:38396301-38396302(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:38396329-38396330(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:38396384-38396385(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:38396451-38396452(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:38396717-38396718(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22608085 chr9:38396759-38396760(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22608085 chr9:38396793-38396794(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:38396808-38396809(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:38396832-38396833(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:38396893-38396894(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:38397105-38397106(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:38397143-38397144(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:38397156-38397157(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:38397291-38397292(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:38397385-38397386(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr9:38397422-38397423(+) m6A 3'UTR       24284625//24209618//24981863//26404942//22575960//22608085 chr9:38397477-38397478(+) m6A 3'UTR       24284625//24209618//24981863//26404942//22575960//22608085 chr9:38397570-38397571(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:38397581-38397582(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:38397623-38397624(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:38397672-38397673(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:38397703-38397704(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:38397754-38397755(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:38397899-38397900(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22608085 chr9:38398017-38398018(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr9:38398026-38398027(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr9:38398043-38398044(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr9:38398072-38398073(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr9:38398128-38398129(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22608085 chr9:38398220-38398221(+) m6A 3'UTR       24209618//24981863//22608085 chr9:38398260-38398261(+) m6A 3'UTR       24209618//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ALDH1B1	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HCC cell line (HepG2)     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H6-5p
Interactor2: ALDH1B1

Evidence Support:

Prediction-Evidence	cRep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg