Basic Information:

  VIRBase ID:  

VHID00146731

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H5-5p:  MIMAT0015280          CCDC39:  NM_181426     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H5-5p	CCDC39
miRBase Accession/Entrez ID	MIMAT0015280	339829
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CFAP59//CILD14//FAP59

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CCDC39	chr3:180390299(-) A-I      intronic chr3:180390260(-) A-I      intronic chr3:180382769(-) A-I      intronic

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CCDC39	Exosome Blood     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H5-5p
Interactor2: CCDC39

Evidence Support:

Prediction-Evidence	miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg