Basic Information:

  VIRBase ID:  

VHID00144382

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H5-5p:  MIMAT0015280          ABTB2:  NM_145804     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H5-5p	ABTB2
miRBase Accession/Entrez ID	MIMAT0015280	25841
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ABTB2A//BTBD22

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ABTB2	chr11:34293194(-) A-I      intronic chr11:34287136(-) A-I      intronic chr11:34287085(-) A-I      intronic chr11:34287098(-) A-I      intronic chr11:34287099(-) A-I      intronic chr11:34287107(-) A-I      intronic chr11:34287148(-) A-I      intronic chr11:34287123(-) A-I      intronic chr11:34287083(-) A-I      intronic chr11:34323422(-) A-I      intronic chr11:34323394(-) A-I      intronic chr11:34320204(-) A-I      intronic chr11:34320180(-) A-I      intronic chr11:34325485(-) A-I      intronic chr11:34320138(-) A-I      intronic chr11:34319191(-) A-I      intronic chr11:34317571(-) A-I      intronic chr11:34316730(-) A-I      intronic chr11:34316649(-) A-I      intronic chr11:34329524(-) A-I      intronic chr11:34316636(-) A-I      intronic chr11:34316623(-) A-I      intronic chr11:34316609(-) A-I      intronic chr11:34316527(-) A-I      intronic chr11:34316417(-) A-I      intronic chr11:34315845(-) A-I      intronic chr11:34315832(-) A-I      intronic chr11:34315831(-) A-I      intronic chr11:34315449(-) A-I      intronic chr11:34315446(-) A-I      intronic chr11:34315439(-) A-I      intronic chr11:34315436(-) A-I      intronic chr11:34315410(-) A-I      intronic chr11:34313154(-) A-I      intronic chr11:34313139(-) A-I      intronic chr11:34309091(-) A-I      intronic chr11:34309034(-) A-I      intronic chr11:34309027(-) A-I      intronic chr11:34308996(-) A-I      intronic chr11:34308984(-) A-I      intronic chr11:34308957(-) A-I      intronic chr11:34308943(-) A-I      intronic chr11:34308934(-) A-I      intronic chr11:34308868(-) A-I      intronic chr11:34307870(-) A-I      intronic chr11:34307762(-) A-I      intronic chr11:34307665(-) A-I      intronic chr11:34301564(-) A-I      intronic chr11:34301419(-) A-I      intronic chr11:34301412(-) A-I      intronic chr11:34300845(-) A-I      intronic chr11:34299617(-) A-I      intronic chr11:34299579(-) A-I      intronic chr11:34299551(-) A-I      intronic chr11:34299530(-) A-I      intronic chr11:34299113(-) A-I      intronic chr11:34299105(-) A-I      intronic chr11:34299101(-) A-I      intronic chr11:34299087(-) A-I      intronic chr11:34299086(-) A-I      intronic chr11:34293186(-) A-I      intronic chr11:34328238(-) A-I      intronic chr11:34309087(-) A-I      intronic chr11:34293083(-) A-I      intronic chr11:34344000(-) A-I      intronic chr11:34325427(-) A-I      intronic chr11:34328271(-) A-I      intronic chr11:34348008(-) A-I      intronic chr11:34346643(-) A-I      intronic chr11:34316179(-) A-I      intronic chr11:34293074(-) A-I      intronic chr11:34292047(-) A-I      intronic chr11:34292027(-) A-I      intronic chr11:34292025(-) A-I      intronic chr11:34292001(-) A-I      intronic chr11:34287850(-) A-I      intronic chr11:34287790(-) A-I      intronic chr11:34287786(-) A-I      intronic chr11:34287758(-) A-I      intronic chr11:34287739(-) A-I      intronic chr11:34287482(-) A-I      intronic chr11:34287404(-) A-I      intronic chr11:34287344(-) A-I      intronic chr11:34287294(-) A-I      intronic chr11:34287259(-) A-I      intronic chr11:34281414(-) A-I      intronic chr11:34282575(-) A-I      intronic chr11:34282489(-) A-I      intronic chr11:34275141(-) A-I      intronic chr11:34275123(-) A-I      intronic chr11:34275098(-) A-I      intronic chr11:34271345(-) A-I      intronic chr11:34271315(-) A-I      intronic chr11:34271312(-) A-I      intronic chr11:34269927(-) A-I      intronic chr11:34268533(-) A-I      intronic chr11:34268523(-) A-I      intronic chr11:34268492(-) A-I      intronic chr11:34268491(-) A-I      intronic chr11:34348512(-) A-I      intronic chr11:34178199(-) A-I      intronic chr11:34360214(-) A-I      intronic chr11:34268480(-) A-I      intronic chr11:34266433(-) A-I      intronic chr11:34266338(-) A-I      intronic chr11:34255030(-) A-I      intronic chr11:34254485(-) A-I      intronic chr11:34252509(-) A-I      intronic chr11:34250906(-) A-I      intronic chr11:34250773(-) A-I      intronic chr11:34250583(-) A-I      intronic chr11:34250034(-) A-I      intronic chr11:34250024(-) A-I      intronic chr11:34250017(-) A-I      intronic chr11:34249464(-) A-I      intronic chr11:34249459(-) A-I      intronic chr11:34249449(-) A-I      intronic chr11:34249419(-) A-I      intronic chr11:34248473(-) A-I      intronic chr11:34248447(-) A-I      intronic chr11:34243539(-) A-I      intronic chr11:34243505(-) A-I      intronic chr11:34243464(-) A-I      intronic chr11:34243423(-) A-I      intronic chr11:34241084(-) A-I      intronic chr11:34241008(-) A-I      intronic chr11:34241007(-) A-I      intronic chr11:34241004(-) A-I      intronic chr11:34241003(-) A-I      intronic chr11:34240990(-) A-I      intronic chr11:34240968(-) A-I      intronic chr11:34240231(-) A-I      intronic chr11:34240209(-) A-I      intronic chr11:34238186(-) A-I      intronic chr11:34233389(-) A-I      intronic chr11:34233314(-) A-I      intronic chr11:34210979(-) A-I      intronic chr11:34202723(-) A-I      intronic chr11:34202722(-) A-I      intronic chr11:34197715(-) A-I      intronic chr11:34197642(-) A-I      intronic chr11:34255108(-) A-I      intronic chr11:34254314(-) A-I      intronic chr11:34304594(-) A-I      intronic chr11:34346598(-) A-I      intronic chr11:34298471(-) A-I      intronic chr11:34346578(-) A-I      intronic chr11:34280251(-) A-I      intronic chr11:34301537(-) A-I      intronic chr11:34348398(-) A-I      intronic chr11:34275968(-) A-I      intronic chr11:34259272(-) A-I      intronic chr11:34280270(-) A-I      intronic chr11:34365124(-) A-I      intronic chr11:34366117(-) A-I      intronic chr11:34304785(-) A-I      intronic chr11:34298681(-) A-I      intronic chr11:34275140(-) A-I      intronic chr11:34315694(-) A-I      intronic chr11:34345637(-) A-I      intronic chr11:34267982(-) A-I      intronic chr11:34293068(-) A-I      intronic chr11:34348029(-) A-I      intronic chr11:34325937(-) A-I      intronic chr11:34316170(-) A-I      intronic chr11:34245832(-) A-I      intronic chr11:34260961(-) A-I      intronic chr11:34346592(-) A-I      intronic chr11:34320187(-) A-I      intronic chr11:34360153(-) A-I      intronic chr11:34281629(-) A-I      intronic chr11:34339132(-) A-I      intronic chr11:34309001(-) A-I      intronic chr11:34315782(-) A-I      intronic chr11:34266362(-) A-I      intronic chr11:34348559(-) A-I      intronic chr11:34315455(-) A-I      intronic chr11:34343998(-) A-I      intronic chr11:34368907(-) A-I      intronic chr11:34267983(-) A-I      intronic chr11:34287122(-) A-I      intronic chr11:34268048(-) A-I      intronic chr11:34250100(-) A-I      intronic chr11:34266337(-) A-I      intronic chr11:34320191(-) A-I      intronic chr11:34344075(-) A-I      intronic chr11:34253298(-) A-I      intronic chr11:34299309(-) A-I      intronic chr11:34282570(-) A-I      intronic chr11:34315472(-) A-I      intronic chr11:34319128(-) A-I      intronic chr11:34309044(-) A-I      intronic chr11:34365214(-) A-I      intronic chr11:34365084(-) A-I      intronic chr11:34365060(-) A-I      intronic chr11:34365057(-) A-I      intronic chr11:34365055(-) A-I      intronic chr11:34360248(-) A-I      intronic chr11:34360145(-) A-I      intronic chr11:34348576(-) A-I      intronic chr11:34348539(-) A-I      intronic chr11:34348535(-) A-I      intronic chr11:34348445(-) A-I      intronic chr11:34348425(-) A-I      intronic chr11:34348399(-) A-I      intronic chr11:34348382(-) A-I      intronic chr11:34348101(-) A-I      intronic chr11:34347978(-) A-I      intronic chr11:34347953(-) A-I      intronic chr11:34344681(-) A-I      intronic chr11:34344672(-) A-I      intronic chr11:34344621(-) A-I      intronic chr11:34344573(-) A-I      intronic chr11:34344533(-) A-I      intronic chr11:34344108(-) A-I      intronic chr11:34344065(-) A-I      intronic chr11:34344059(-) A-I      intronic chr11:34344046(-) A-I      intronic chr11:34344040(-) A-I      intronic chr11:34344010(-) A-I      intronic chr11:34343973(-) A-I      intronic chr11:34343943(-) A-I      intronic chr11:34343931(-) A-I      intronic chr11:34343918(-) A-I      intronic chr11:34343905(-) A-I      intronic chr11:34339790(-) A-I      intronic chr11:34339783(-) A-I      intronic chr11:34339780(-) A-I      intronic chr11:34339695(-) A-I      intronic chr11:34339694(-) A-I      intronic chr11:34339678(-) A-I      intronic chr11:34339652(-) A-I      intronic chr11:34339610(-) A-I      intronic chr11:34334396(-) A-I      intronic chr11:34334394(-) A-I      intronic chr11:34330336(-) A-I      intronic chr11:34330332(-) A-I      intronic chr11:34329515(-) A-I      intronic chr11:34329489(-) A-I      intronic chr11:34329428(-) A-I      intronic chr11:34329402(-) A-I      intronic chr11:34329343(-) A-I      intronic chr11:34329342(-) A-I      intronic chr11:34328149(-) A-I      intronic chr11:34328058(-) A-I      intronic chr11:34328040(-) A-I      intronic chr11:34328036(-) A-I      intronic chr11:34327982(-) A-I      intronic chr11:34248758(-) A-I      intronic chr11:34289771(-) A-I      intronic chr11:34327957(-) A-I      intronic chr11:34327932(-) A-I      intronic chr11:34327882(-) A-I      intronic chr11:34326182(-) A-I      intronic chr11:34325463(-) A-I      intronic chr11:34325462(-) A-I      intronic chr11:34325328(-) A-I      intronic chr11:34325327(-) A-I      intronic chr11:34267977(-) A-I      intronic chr11:34329439(-) A-I      intronic chr11:34238215(-) A-I      intronic chr11:34346627(-) A-I      intronic chr11:34345546(-) A-I      intronic chr11:34315851(-) A-I      intronic chr11:34316533(-) A-I      intronic chr11:34316731(-) A-I      intronic chr11:34355085(-) A-I      intronic chr11:34339625(-) A-I      intronic chr11:34328265(-) A-I      intronic chr11:34315452(-) A-I      intronic chr11:34254313(-) A-I      intronic chr11:34348136(-) A-I      intronic chr11:34333625(-) A-I      intronic chr11:34345553(-) A-I      intronic chr11:34344070(-) A-I      intronic chr11:34238291(-) A-I      intronic chr11:34287708(-) A-I      intronic chr11:34323314(-) A-I      intronic chr11:34345582(-) A-I      intronic chr11:34293041(-) A-I      intronic chr11:34304211(-) A-I      intronic chr11:34275829(-) A-I      intronic chr11:34329516(-) A-I      intronic chr11:34366248(-) A-I      intronic chr11:34298626(-) A-I      intronic chr11:34339233(-) A-I      intronic chr11:34293198(-) A-I      intronic chr11:34347341(-) A-I      intronic chr11:34282522(-) A-I      intronic chr11:34320246(-) A-I      intronic chr11:34304738(-) A-I      intronic chr11:34323503(-) A-I      intronic chr11:34334402(-) A-I      intronic chr11:34249290(-) A-I      intronic chr11:34243509(-) A-I      intronic chr11:34281631(-) A-I      intronic chr11:34328176(-) A-I      intronic chr11:34304171(-) A-I      intronic chr11:34346639(-) A-I      intronic chr11:34316738(-) A-I      intronic chr11:34250102(-) A-I      intronic chr11:34319104(-) A-I      intronic chr11:34291952(-) A-I      intronic chr11:34334345(-) A-I      intronic chr11:34323386(-) A-I      intronic chr11:34368975(-) A-I      intronic chr11:34281559(-) A-I      intronic chr11:34281427(-) A-I      intronic chr11:34316671(-) A-I      intronic chr11:34323451(-) A-I      intronic chr11:34304212(-) A-I      intronic chr11:34309013(-) A-I      intronic chr11:34308659(-) A-I      intronic chr11:34250092(-) A-I      intronic chr11:34364654(-) A-I      intronic chr11:34178071(-) A-I      intronic chr11:34299080(-) A-I      intronic chr11:34270613(-) A-I      intronic chr11:34307654(-) A-I      intronic chr11:34298691(-) A-I      intronic chr11:34298522(-) A-I      intronic chr11:34327890(-) A-I      intronic chr11:34307685(-) A-I      intronic chr11:34282593(-) A-I      intronic chr11:34339806(-) A-I      intronic chr11:34348553(-) A-I      intronic chr11:34282587(-) A-I      intronic chr11:34275214(-) A-I      intronic chr11:34293120(-) A-I      intronic chr11:34333605(-) A-I      intronic chr11:34328067(-) A-I      intronic chr11:34260478(-) A-I      intronic chr11:34239179(-) A-I      intronic chr11:34316534(-) A-I      intronic chr11:34249947(-) A-I      intronic chr11:34250088(-) A-I      intronic chr11:34293228(-) A-I      intronic chr11:34243516(-) A-I      intronic chr11:34304046(-) A-I      intronic chr11:34270564(-) A-I      intronic chr11:34289718(-) A-I      intronic chr11:34358617(-) A-I      intronic chr11:34282644(-) A-I      intronic chr11:34348005(-) A-I      intronic chr11:34328066(-) A-I      intronic chr11:34327931(-) A-I      intronic chr11:34344549(-) A-I      intronic chr11:34243403(-) A-I      intronic chr11:34307786(-) A-I      intronic chr11:34287878(-) A-I      intronic chr11:34282623(-) A-I      intronic chr11:34304170(-) A-I      intronic chr11:34345595(-) A-I      intronic chr11:34275204(-) A-I      intronic chr11:34299244(-) A-I      intronic chr11:34328171(-) A-I      intronic chr11:34298521(-) A-I      intronic chr11:34250590(-) A-I      intronic chr11:34347376(-) A-I      intronic chr11:34262308(-) A-I      intronic chr11:34316648(-) A-I      intronic chr11:34275185(-) A-I      intronic chr11:34243591(-) A-I      intronic chr11:34320183(-) A-I      intronic chr11:34309020(-) A-I      intronic chr11:34277094(-) A-I      intronic chr11:34255025(-) A-I      intronic chr11:34304185(-) A-I      intronic chr11:34253914(-) A-I      intronic chr11:34258882(-) A-I      intronic chr11:34329344(-) A-I      intronic chr11:34320251(-) A-I      intronic chr11:34240970(-) A-I      intronic chr11:34347349(-) A-I      intronic chr11:34239173(-) A-I      intronic chr11:34315662(-) A-I      intronic chr11:34323313(-) A-I      intronic chr11:34271221(-) A-I      intronic chr11:34262304(-) A-I      intronic chr11:34315794(-) A-I      intronic chr11:34270421(-) A-I      intronic chr11:34262414(-) A-I      intronic chr11:34287702(-) A-I      intronic chr11:34358130(-) A-I      intronic chr11:34360170(-) A-I      intronic chr11:34304737(-) A-I      intronic chr11:34304176(-) A-I      intronic chr11:34344308(-) A-I      intronic chr11:34293065(-) A-I      intronic chr11:34178244(-) A-I      intronic chr11:34269757(-) A-I      intronic chr11:34325877(-) A-I      intronic chr11:34344053(-) A-I      intronic chr11:34315777(-) A-I      intronic chr11:34254412(-) A-I      intronic chr11:34287831(-) A-I      intronic chr11:34344610(-) A-I      intronic chr11:34326164(-) A-I      intronic chr11:34323390(-) A-I      intronic chr11:34348502(-) A-I      intronic chr11:34281463(-) A-I      intronic chr11:34344602(-) A-I      intronic chr11:34270669(-) A-I      intronic chr11:34259432(-) A-I      intronic chr11:34343992(-) A-I      intronic chr11:34360212(-) A-I      intronic chr11:34289727(-) A-I      intronic chr11:34317593(-) A-I      intronic chr11:34282594(-) A-I      intronic chr11:34368900(-) A-I      intronic chr11:34287859(-) A-I      intronic chr11:34289706(-) A-I      intronic chr11:34333636(-) A-I      intronic chr11:34250579(-) A-I      intronic chr11:34320166(-) A-I      intronic chr11:34339214(-) A-I      intronic chr11:34309036(-) A-I      intronic chr11:34178208(-) A-I      intronic chr11:34368976(-) A-I      intronic chr11:34281406(-) A-I      intronic chr11:34175060(-) A-I      intronic chr11:34242655(-) A-I      intronic chr11:34344100(-) A-I      intronic chr11:34280315(-) A-I      intronic chr11:34280312(-) A-I      intronic chr11:34316295(-) A-I      intronic chr11:34339709(-) A-I      intronic chr11:34339055(-) A-I      intronic chr11:34358146(-) A-I      intronic chr11:34298587(-) A-I      intronic chr11:34289757(-) A-I      intronic chr11:34330335(-) A-I      intronic chr11:34320284(-) A-I      intronic chr11:34243589(-) A-I      intronic chr11:34315724(-) A-I      intronic chr11:34374557(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ABTB2	chr11:34356968(-) A-I intron -    22327324 chr11:34357096(-) A-I intron -    22327324 chr11:34178251(-) T-C intron -    22484847 chr11:34280176(-) C-A intron -    22484847 chr11:34280177(-) T-A intron -    22484847 chr11:34280178(-) C-A intron -    22484847 chr11:34280179(-) T-A intron -    22484847 chr11:34280251(-) A-G intron -    22484847 chr11:34281414(-) A-G intron -    22484847 chr11:34298521(-) A-G intron -    22484847 chr11:34298522(-) A-G intron -    22484847 chr11:34304594(-) A-G intron -    22484847 chr11:34307654(-) A-G intron -    22484847 chr11:34319104(-) A-G intron -    22484847 chr11:34345595(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ABTB2	chr11:34172771-34172772(-) m6A 3'UTR       24981863 chr11:34172840-34172841(-) m6A 3'UTR       24981863 chr11:34172845-34172846(-) m6A 3'UTR       24981863 chr11:34172963-34172964(-) m6A 3'UTR       - chr11:34172987-34172988(-) m6A 3'UTR       - chr11:34173003-34173004(-) m6A 3'UTR       - chr11:34173089-34173090(-) m6A 3'UTR       - chr11:34182457-34182458(-) m6A CDS       27773535 chr11:34182537-34182538(-) m6A CDS       24284625 chr11:34182586-34182587(-) m6A CDS       24284625 chr11:34184148-34184149(-) m6A CDS       24284625 chr11:34184206-34184207(-) m6A CDS       24284625 chr11:34194770-34194771(-) m6A CDS//exon       24284625 chr11:34218880-34218881(-) m6A CDS//exon       24284625 chr11:34218901-34218902(-) m6A CDS//exon       24284625 chr11:34218913-34218914(-) m6A CDS//exon       24284625 chr11:34226141-34226142(-) m6A CDS//exon       24284625 chr11:34378420-34378421(-) m6A CDS       24284625 chr11:34378483-34378484(-) m6A CDS       24284625 chr11:34378832-34378833(-) m6A CDS       24284625//25456834//27773536//22608085 chr11:34378897-34378898(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr11:34378915-34378916(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr11:34378924-34378925(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr11:34378945-34378946(-) m6A CDS       24284625//25456834//24981863//26404942//27371828//27773536//22575960//22608085 chr11:34379056-34379057(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr11:34379077-34379078(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr11:34379089-34379090(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr11:34379397-34379398(-) m6A 5'UTR       24284625//25456834//24981863//27371828//27773536//22608085 chr11:34379429-34379430(-) m6A 5'UTR       24284625//25456834//24981863//27371828//27773536//22608085 chr11:34379516-34379517(-) m6A 5'UTR       24284625//25456834//24981863//27371828//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ABTB2	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H5-5p
Interactor2: ABTB2

Evidence Support:

Prediction-Evidence	miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg