Basic Information:

  VIRBase ID:  

VHID00143429

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H5-5p:  MIMAT0015280          HSD17B8:  NM_014234     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H5-5p	HSD17B8
miRBase Accession/Entrez ID	MIMAT0015280	7923
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	D6S2245E//dJ1033B10.9//FABG//FABGL//H2-KE6//HKE6//KE6//RING2//SDR30C1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	HSD17B8	chr6:33172464-33172465(+) m6A CDS//exon       24284625//24981863 chr6:33172756-33172757(+) m6A CDS//exon       24284625//24981863 chr6:33172828-33172829(+) m6A CDS//exon       24284625 chr6:33173434-33173435(+) m6A CDS//exon       24981863 chr6:33173479-33173480(+) m6A CDS//exon       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	HSD17B8	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H5-5p
Interactor2: HSD17B8

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg