Basic Information:

  VIRBase ID:  

VHID00142670

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H5-5p:  MIMAT0015280          JUND:  NM_001286968     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H5-5p	JUND
miRBase Accession/Entrez ID	MIMAT0015280	3727
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AP-1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	JUND	chr19:18390803-18390804(-) m6A 3'UTR       24209618//27773535 chr19:18390845-18390846(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//27371828//27773536//22575960//22608085 chr19:18390900-18390901(-) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr19:18390970-18390971(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr19:18391056-18391057(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr19:18391070-18391071(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr19:18391122-18391123(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr19:18391149-18391150(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr19:18391174-18391175(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr19:18391374-18391375(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr19:18391390-18391391(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr19:18391503-18391504(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27371828//27773536//22575960//22608085 chr19:18391640-18391641(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085 chr19:18391707-18391708(-) m6A CDS       24209618//25456834//24981863//28052920//27371828//27773536//22575960 chr19:18391842-18391843(-) m6A CDS       24284625//24209618//26404942//27773535 chr19:18392155-18392156(-) m1A CDS       26863196//26863410 chr19:18392287-18392288(-) m6A CDS       24209618//28052920//27371828//27773536//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	JUND	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H5-5p
Interactor2: JUND

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg