Basic Information:

  VIRBase ID:  

VHID00142579

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H5-5p:  MIMAT0015280          HPCA:  NM_002143     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H5-5p	HPCA
miRBase Accession/Entrez ID	MIMAT0015280	3208
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BDR2//DYT2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	HPCA	chr1:33360229(+) A-I      3'UTR chr1:33360227(+) A-I      3'UTR chr1:33360224(+) A-I      3'UTR chr1:33360218(+) A-I      3'UTR chr1:33360219(+) A-I      3'UTR chr1:33360231(+) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	HPCA	chr1:33354740-33354741(+) m6A CDS//exon//intron       22575960 chr1:33363658-33363659(+) m6A exon       - chr1:33363669-33363670(+) m6A exon       - chr1:33363929-33363930(+) m6A exon       - chr1:33364006-33364007(+) m6A exon       24209618

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	HPCA	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H5-5p
Interactor2: HPCA

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg