Detail Information

Basic Information:


  VIRBase ID:  

VHID00142164

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H5-5p:           CHAD:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H5-5p CHAD
miRBase
Accession/Entrez ID
MIMAT0015280 1101
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - SLRR4A

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CHAD
chr17:48542038-48542039(-) m6A 3'UTR       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CHAD
Exosome Blood     -
Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H5-5p
Interactor2: CHAD

Evidence Support:


Prediction-Evidence cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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