Detail Information

Basic Information:


  VIRBase ID:  

VHID00141883

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H3-5p:           TEKT4P2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H3-5p TEKT4P2
miRBase
Accession/Entrez ID		 MIMAT0015279 100132288
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA pseudo
Alias - MAFIPL//TEKT4P

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR TEKT4P2
chr21:9952513(-) A-I      intronic
chr21:9952522(-) A-I      intronic
chr21:9945203(-) A-I      intronic
chr21:9952291(-) A-I      intronic
chr21:9952551(-) A-I      intronic
chr21:9952585(-) A-I      intronic
chr21:9916910(-) A-I      intronic
chr21:9952629(-) A-I      intronic
chr21:9952730(-) A-I      intronic
chr21:9960091(-) A-I      intronic
chr21:9923698(-) A-I      intronic
chr21:9960175(-) A-I      intronic
chr21:9923910(-) A-I      intronic
chr21:9960944(-) A-I      intronic
chr21:9961873(-) A-I      intronic
chr21:9924051(-) A-I      intronic
chr21:9961912(-) A-I      intronic
chr21:9961989(-) A-I      intronic
chr21:9924062(-) A-I      intronic
chr21:9945181(-) A-I      intronic
chr21:9945243(-) A-I      intronic
chr21:9945260(-) A-I      intronic
chr21:9945263(-) A-I      intronic
chr21:9945559(-) A-I      intronic
chr21:9948561(-) A-I      intronic
chr21:9948575(-) A-I      intronic
chr21:9948584(-) A-I      intronic
chr21:9952254(-) A-I      intronic
chr21:9948592(-) A-I      intronic
chr21:9923645(-) A-I      intronic
chr21:9923648(-) A-I      intronic
chr21:9961895(-) A-I      intronic
chr21:9961300(-) A-I      intronic
chr21:9961313(-) A-I      intronic
chr21:9952568(-) A-I      intronic
chr21:9961336(-) A-I      intronic
chr21:9923871(-) A-I      intronic
chr21:9961345(-) A-I      intronic
chr21:9961369(-) A-I      intronic
chr21:9923978(-) A-I      intronic
chr21:9920971(-) A-I      intronic
chr21:9946103(-) A-I      intronic
chr21:9945573(-) A-I      intronic
chr21:9961297(-) A-I      intronic
chr21:9961350(-) A-I      intronic
chr21:9924022(-) A-I      intronic
chr21:9961368(-) A-I      intronic
chr21:9961342(-) A-I      intronic
chr21:9923977(-) A-I      intronic
chr21:9916934(-) A-I      intronic
chr21:9946097(-) A-I      intronic
chr21:9961159(-) A-I      intronic
chr21:9952159(-) A-I      intronic
chr21:9948504(-) A-I      intronic
chr21:9923778(-) A-I      intronic
chr21:9923765(-) A-I      intronic
chr21:9952176(-) A-I      intronic
chr21:9923741(-) A-I      intronic
chr21:9945207(-) A-I      intronic
chr21:9960048(-) A-I      intronic
chr21:9952731(-) A-I      intronic
chr21:9956576(-) A-I      intronic
chr21:9946250(-) A-I      intronic
chr21:9952075(-) A-I      intronic
chr21:9961314(-) A-I      intronic
chr21:9923688(-) A-I      intronic
chr21:9945689(-) A-I      intronic
chr21:9916909(-) A-I      intronic
chr21:9921115(-) A-I      intronic
chr21:9945556(-) A-I      intronic
chr21:9923710(-) A-I      intronic
chr21:9952076(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED TEKT4P2
chr21:9961297(-) A-I intron -    22028664
chr21:9961300(-) A-I intron -    22028664
chr21:9961313(-) A-I intron -    22028664
chr21:9961314(-) A-I intron -    22028664
chr21:9961336(-) A-I intron -    22028664
chr21:9961342(-) A-I intron -    22028664
chr21:9961345(-) A-I intron -    22028664
chr21:9961350(-) A-I intron -    22028664
chr21:9961368(-) A-I intron -    22028664
chr21:9961369(-) A-I intron -    22028664

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase TEKT4P2
chr21:9907370-9907371(-) m6A exon       24284625//24981863//27773535
chr21:9907564-9907565(-) m6A exon//intron       27773535
chr21:9908103-9908104(-) m6A exon//intron       24284625//27773535
chr21:9908117-9908118(-) m6A exon//intron       24284625//27773535
chr21:9908154-9908155(-) m6A exon//intron       24284625//27773535
chr21:9908206-9908207(-) m6A exon//intron       24284625//27773535
chr21:9908341-9908342(-) m6A exon       24284625//24981863//27773535//27371828//22608085
chr21:9908360-9908361(-) m6A exon       24284625//24981863//27773535//27371828//22608085
chr21:9908370-9908371(-) m6A exon       24284625//24981863//27773535//27371828//22608085
chr21:9908405-9908406(-) m6A exon       24284625//24981863//27773535//27371828//27773536//22608085
chr21:9908499-9908500(-) m6A intron       24284625//24981863//27773535//27371828//27773536//22608085
chr21:9908504-9908505(-) m6A intron       24284625//24981863//27371828//27773536//22608085
chr21:9908528-9908529(-) m6A intron       24284625//24981863//27371828//27773536//22608085
chr21:9908540-9908541(-) m6A intron       24284625//24209618//24981863//27371828//27773536//22608085
chr21:9908629-9908630(-) m6A intron       24284625//24209618//24981863//27371828//27773536//22608085
chr21:9908643-9908644(-) m6A intron       24284625//24209618//24981863//27371828//27773536//22608085
chr21:9908889-9908890(-) m6A intron       24284625//24981863//27773535//22608085
chr21:9908900-9908901(-) m6A intron       24284625//24981863//27773535//22608085
chr21:9908930-9908931(-) m6A intron       24284625//24981863//27773535//22608085
chr21:9909031-9909032(-) m6A intron       24284625//24981863//27371828//27773536//22608085
chr21:9909088-9909089(-) m6A exon       24284625//24981863//27371828//27773536//22608085
chr21:9909116-9909117(-) m6A exon       24284625//24981863//27371828//27773536//22608085
chr21:9909136-9909137(-) m6A exon       24284625//24981863//27371828//27773536//22608085
chr21:9909143-9909144(-) m6A exon       24284625//24981863//27371828//27773536//22608085
chr21:9909170-9909171(-) m6A exon       24284625//24981863//27371828//27773536//22608085
chr21:9909197-9909198(-) m6A exon       24284625//24981863//27371828//27773536//22608085
chr21:9909230-9909231(-) m6A exon       24284625//24981863//27371828//27773536//22608085
chr21:9909246-9909247(-) m6A exon       24284625//24981863//27371828//27773536//22608085
chr21:9909252-9909253(-) m6A exon       24284625//24981863//27371828//27773536//22608085
chr21:9910007-9910008(-) m6A exon//intron       24284625//24981863//22608085
chr21:9910036-9910037(-) m6A exon//intron       24981863//22608085
chr21:9910045-9910046(-) m6A exon//intron       24981863//22608085
chr21:9910075-9910076(-) m6A exon//intron       -
chr21:9912079-9912080(-) m6A exon//intron       27371828//27773536//22608085
chr21:9912135-9912136(-) m6A exon//intron       24284625//27371828//27773536//22608085
chr21:9912168-9912169(-) m6A exon//intron       24284625//27371828//27773536//22608085
chr21:9912199-9912200(-) m6A exon//intron       24284625//27371828//27773536//22608085
chr21:9912291-9912292(-) m6A exon//intron       24284625
chr21:9912399-9912400(-) m6A exon//intron       24284625
chr21:9921527-9921528(-) m6A intron       -
chr21:9921589-9921590(-) m6A intron       -
chr21:9921598-9921599(-) m6A intron       -
chr21:9921606-9921607(-) m6A intron       -
chr21:9921686-9921687(-) m6A intron       -
chr21:9921714-9921715(-) m6A intron       -
chr21:9921800-9921801(-) m6A intron       -
chr21:9921819-9921820(-) m6A intron       -
chr21:9921878-9921879(-) m6A intron       -
chr21:9921906-9921907(-) m6A intron       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate TEKT4P2
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H3-5p
Interactor2: TEKT4P2

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid//Targetscan
Support Database VmiReg

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