Basic Information:

  VIRBase ID:  

VHID00141846

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H3-5p:  MIMAT0015279          ZBTB8B:  NM_001145720     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H3-5p	ZBTB8B
miRBase Accession/Entrez ID	MIMAT0015279	728116
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ZNF916B

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZBTB8B	chr1:32939982(+) A-I      intronic chr1:32939720(+) A-I      intronic chr1:32934315(+) A-I      intronic chr1:32934342(+) A-I      intronic chr1:32939642(+) A-I      intronic chr1:32932713(+) A-I      intronic chr1:32935078(+) A-I      intronic chr1:32948938(+) A-I      intronic chr1:32947724(+) A-I      intronic chr1:32934407(+) A-I      intronic chr1:32938796(+) A-I      intronic chr1:32940018(+) A-I      intronic chr1:32938832(+) A-I      intronic chr1:32939661(+) A-I      intronic chr1:32932511(+) A-I      intronic chr1:32935711(+) A-I      intronic chr1:32939981(+) A-I      intronic chr1:32953287(+) A-I      3'UTR chr1:32953285(+) A-I      3'UTR chr1:32953185(+) A-I      3'UTR chr1:32934700(+) A-I      intronic chr1:32953323(+) A-I      3'UTR chr1:32932953(+) A-I      intronic chr1:32953214(+) A-I      3'UTR chr1:32932664(+) A-I      intronic chr1:32953257(+) A-I      3'UTR chr1:32932637(+) A-I      intronic chr1:32953296(+) A-I      3'UTR chr1:32934351(+) A-I      intronic chr1:32939850(+) A-I      intronic chr1:32941695(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ZBTB8B	chr1:32953257(+) A-I exon 3'UTR    15258596 chr1:32953285(+) A-I exon 3'UTR    15258596 chr1:32953296(+) A-I exon 3'UTR    15258596 chr1:32953323(+) A-I exon 3'UTR    15258596

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZBTB8B	chr1:32930694-32930695(+) m6A 5'UTR       22608085 chr1:32936272-32936273(+) m6A CDS       25456834//24981863//22608085 chr1:32936286-32936287(+) m6A CDS       25456834//24981863//22608085 chr1:32936343-32936344(+) m6A CDS       25456834//24981863//22608085 chr1:32936400-32936401(+) m6A CDS       25456834//24981863//22608085 chr1:32936430-32936431(+) m6A CDS       25456834//24981863//22608085 chr1:32936559-32936560(+) m6A CDS       25456834//22608085 chr1:32936570-32936571(+) m6A CDS       25456834//22608085 chr1:32936726-32936727(+) m6A CDS       25456834//22608085 chr1:32936820-32936821(+) m6A CDS       25456834//24981863//22608085 chr1:32936836-32936837(+) m6A CDS       25456834//24981863//22608085 chr1:32936850-32936851(+) m6A CDS       25456834//24981863//22608085 chr1:32936956-32936957(+) m6A CDS       25456834//24981863//22608085 chr1:32936985-32936986(+) m6A CDS       25456834//24981863//22608085 chr1:32937114-32937115(+) m6A CDS       25456834//22608085 chr1:32937145-32937146(+) m6A CDS       25456834//22608085 chr1:32950746-32950747(+) m6A CDS       22608085 chr1:32950816-32950817(+) m6A CDS       25456834//22608085 chr1:32950903-32950904(+) m6A CDS       25456834//24981863//22608085 chr1:32950973-32950974(+) m6A CDS       25456834//24981863//22608085 chr1:32950999-32951000(+) m6A CDS       25456834//24981863//22608085 chr1:32951007-32951008(+) m6A CDS       25456834//24981863//22608085 chr1:32951051-32951052(+) m6A 3'UTR       25456834//24981863//22608085 chr1:32951105-32951106(+) m6A 3'UTR       22608085 chr1:32951117-32951118(+) m6A 3'UTR       22608085 chr1:32951155-32951156(+) m6A 3'UTR       22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZBTB8B	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H3-5p
Interactor2: ZBTB8B

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg