Basic Information:

  VIRBase ID:  

VHID00141808

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H3-5p:  MIMAT0015279          TRIM72:  NM_001008274     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H3-5p	TRIM72
miRBase Accession/Entrez ID	MIMAT0015279	493829
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MG53

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TRIM72	chr16:31233536(+) A-I      intronic chr16:31233528(+) A-I      intronic chr16:31233527(+) A-I      intronic chr16:31233499(+) A-I      intronic chr16:31236459(+) A-I      3'UTR chr16:31236436(+) A-I      3'UTR chr16:31236302(+) A-I      3'UTR chr16:31236380(+) A-I      3'UTR chr16:31236431(+) A-I      3'UTR chr16:31233603(+) A-I      intronic chr16:31231864(+) A-I      intronic chr16:31236257(+) A-I      3'UTR chr16:31236390(+) A-I      3'UTR chr16:31228731(+) A-I      intronic chr16:31231469(+) A-I      intronic chr16:31229963(+) A-I      intronic chr16:31233535(+) A-I      intronic chr16:31228707(+) A-I      intronic chr16:31229892(+) A-I      intronic chr16:31231869(+) A-I      intronic chr16:31229133(+) A-I      intronic chr16:31236248(+) A-I      3'UTR chr16:31236382(+) A-I      3'UTR chr16:31236391(+) A-I      3'UTR chr16:31236432(+) A-I      3'UTR chr16:31236310(+) A-I      3'UTR chr16:31236336(+) A-I      3'UTR chr16:31236400(+) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TRIM72	chr16:31236550-31236551(+) m6A 3'UTR//intron       - chr16:31236582-31236583(+) m6A 3'UTR//intron       - chr16:31236587-31236588(+) m6A 3'UTR//intron       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TRIM72	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H3-5p
Interactor2: TRIM72

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg