Detail Information

Basic Information:


  VIRBase ID:  

VHID00141791

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H3-5p:           PLIN5:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H3-5p PLIN5
miRBase
Accession/Entrez ID		 MIMAT0015279 440503
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - LSDA5//LSDP5//MLDP//OXPAT

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR PLIN5
chr19:4526787(-) A-I      intronic
chr19:4527729(-) A-I      intronic
chr19:4527735(-) A-I      intronic
chr19:4528019(-) A-I      intronic
chr19:4526471(-) A-I      intronic
chr19:4527757(-) A-I      intronic
chr19:4526810(-) A-I      intronic
chr19:4526447(-) A-I      intronic
chr19:4526800(-) A-I      intronic
chr19:4526801(-) A-I      intronic
chr19:4526489(-) A-I      intronic
chr19:4528105(-) A-I      intronic
chr19:4528116(-) A-I      intronic
chr19:4528126(-) A-I      intronic
chr19:4528150(-) A-I      intronic
chr19:4528171(-) A-I      intronic
chr19:4526636(-) A-I      intronic
chr19:4527770(-) A-I      intronic
chr19:4526696(-) A-I      intronic
chr19:4526707(-) A-I      intronic
chr19:4526715(-) A-I      intronic
chr19:4526250(-) A-I      intronic
chr19:4526269(-) A-I      intronic
chr19:4526281(-) A-I      intronic
chr19:4526306(-) A-I      intronic
chr19:4526310(-) A-I      intronic
chr19:4526319(-) A-I      intronic
chr19:4526339(-) A-I      intronic
chr19:4528090(-) A-I      intronic
chr19:4527775(-) A-I      intronic
chr19:4527795(-) A-I      intronic
chr19:4527989(-) A-I      intronic
chr19:4528027(-) A-I      intronic
chr19:4526437(-) A-I      intronic
chr19:4526480(-) A-I      intronic
chr19:4526484(-) A-I      intronic
chr19:4526504(-) A-I      intronic
chr19:4526505(-) A-I      intronic
chr19:4526528(-) A-I      intronic
chr19:4526623(-) A-I      intronic
chr19:4526770(-) A-I      intronic
chr19:4527032(-) A-I      intronic
chr19:4528046(-) A-I      intronic
chr19:4528050(-) A-I      intronic
chr19:4528060(-) A-I      intronic
chr19:4527185(-) A-I      intronic
chr19:4527045(-) A-I      intronic
chr19:4527081(-) A-I      intronic
chr19:4527123(-) A-I      intronic
chr19:4528086(-) A-I      intronic
chr19:4527177(-) A-I      intronic
chr19:4527184(-) A-I      intronic
chr19:4527193(-) A-I      intronic
chr19:4528089(-) A-I      intronic
chr19:4528091(-) A-I      intronic
chr19:4528092(-) A-I      intronic
chr19:4528093(-) A-I      intronic
chr19:4528096(-) A-I      intronic
chr19:4528099(-) A-I      intronic
chr19:4527164(-) A-I      intronic
chr19:4527209(-) A-I      intronic
chr19:4527212(-) A-I      intronic
chr19:4527264(-) A-I      intronic
chr19:4527589(-) A-I      intronic
chr19:4527626(-) A-I      intronic
chr19:4527725(-) A-I      intronic
chr19:4527733(-) A-I      intronic
chr19:4527745(-) A-I      intronic
chr19:4527748(-) A-I      intronic
chr19:4527749(-) A-I      intronic
chr19:4522792(-) A-I      3'UTR
chr19:4522811(-) A-I      3'UTR
chr19:4522839(-) A-I      3'UTR
chr19:4522810(-) A-I      3'UTR
chr19:4527831(-) A-I      intronic
chr19:4524307(-) A-I      intronic
chr19:4527468(-) A-I      intronic
chr19:4527061(-) A-I      intronic
chr19:4526276(-) A-I      intronic
chr19:4526690(-) A-I      intronic
chr19:4527657(-) A-I      intronic
chr19:4526512(-) A-I      intronic
chr19:4526813(-) A-I      intronic
chr19:4527419(-) A-I      intronic
chr19:4526514(-) A-I      intronic
chr19:4526783(-) A-I      intronic
chr19:4527709(-) A-I      intronic
chr19:4526357(-) A-I      intronic
chr19:4527357(-) A-I      intronic
chr19:4526358(-) A-I      intronic
chr19:4527356(-) A-I      intronic
chr19:4527694(-) A-I      intronic
chr19:4526675(-) A-I      intronic
chr19:4527625(-) A-I      intronic
chr19:4527708(-) A-I      intronic
chr19:4526844(-) A-I      intronic
chr19:4526610(-) A-I      intronic
chr19:4526758(-) A-I      intronic
chr19:4527429(-) A-I      intronic
chr19:4526692(-) A-I      intronic
chr19:4527857(-) A-I      intronic
chr19:4527774(-) A-I      intronic
chr19:4527265(-) A-I      intronic
chr19:4528194(-) A-I      intronic
chr19:4527220(-) A-I      intronic
chr19:4526506(-) A-I      intronic
chr19:4527451(-) A-I      intronic
chr19:4527006(-) A-I      intronic
chr19:4527125(-) A-I      intronic
chr19:4527717(-) A-I      intronic
chr19:4526596(-) A-I      intronic
chr19:4528018(-) A-I      intronic
chr19:4526814(-) A-I      intronic
chr19:4522787(-) A-I      3'UTR
chr19:4526762(-) A-I      intronic
chr19:4526492(-) A-I      intronic
chr19:4526788(-) A-I      intronic
chr19:4527850(-) A-I      intronic
chr19:4527226(-) A-I      intronic
chr19:4526667(-) A-I      intronic
chr19:4524426(-) A-I      intronic
chr19:4527612(-) A-I      intronic
chr19:4527489(-) A-I      intronic
chr19:4527624(-) A-I      intronic
chr19:4527537(-) A-I      intronic
chr19:4526331(-) A-I      intronic
chr19:4527258(-) A-I      intronic
chr19:4526793(-) A-I      intronic
chr19:4527256(-) A-I      intronic
chr19:4528193(-) A-I      intronic
chr19:4526427(-) A-I      intronic
chr19:4527216(-) A-I      intronic
chr19:4527520(-) A-I      intronic
chr19:4524398(-) A-I      intronic
chr19:4527004(-) A-I      intronic
chr19:4527944(-) A-I      intronic
chr19:4527609(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED PLIN5
chr19:4528523(-) A-I intron -    15342557
chr19:4528549(-) A-I intron -    15342557
chr19:4528585(-) A-I intron -    15342557
chr19:4528592(-) A-I intron -    15342557
chr19:4529551(-) A-I intron -    15342557
chr19:4529674(-) A-I intron -    15342557

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PLIN5
chr19:4522656-4522657(-) m6A 3'UTR       -
chr19:4522679-4522680(-) m6A 3'UTR       -
chr19:4522721-4522722(-) m6A 3'UTR       -
chr19:4522799-4522800(-) m6A 3'UTR       -
chr19:4522951-4522952(-) m6A 3'UTR       -
chr19:4523022-4523023(-) m6A 3'UTR       -
chr19:4523129-4523130(-) m6A 3'UTR       -
chr19:4523326-4523327(-) m6A 3'UTR       -
chr19:4523356-4523357(-) m6A 3'UTR       -
chr19:4523364-4523365(-) m6A 3'UTR       -
chr19:4523385-4523386(-) m6A 3'UTR       -
chr19:4523546-4523547(-) m6A CDS       24284625//25456834//27773536//22608085
chr19:4523589-4523590(-) m6A CDS       24284625//25456834//27773536//22608085
chr19:4523596-4523597(-) m6A CDS       24284625//25456834//27773536//22608085
chr19:4523612-4523613(-) m6A CDS       24284625//25456834//27773536//22608085
chr19:4523633-4523634(-) m6A CDS       24284625//25456834//27773536//22608085
chr19:4523699-4523700(-) m6A CDS       25456834//27773536//22608085
chr19:4523750-4523751(-) m6A CDS       25456834//27773536//22608085
chr19:4523803-4523804(-) m6A CDS       25456834//27773536
chr19:4523949-4523950(-) m6A CDS//exon       -
chr19:4525083-4525084(-) m6A CDS//exon       -
chr19:4525678-4525679(-) m6A CDS//exon       -
chr19:4525692-4525693(-) m6A CDS//exon       -
chr19:4525707-4525708(-) m6A CDS//exon       -
chr19:4525785-4525786(-) m6A CDS//exon       -
chr19:4529003-4529004(-) m6A intron       -
chr19:4529212-4529213(-) m6A CDS       -
chr19:4534075-4534076(-) m1A CDS//exon       26863196

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate PLIN5
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H3-5p
Interactor2: PLIN5

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid//Targetscan
Support Database VmiReg

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