Basic Information:

  VIRBase ID:  

VHID00141690

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H3-5p:  MIMAT0015279          TBC1D26:  NM_178571     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H3-5p	TBC1D26
miRBase Accession/Entrez ID	MIMAT0015279	353149
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TBC1D26	chr17:15603380-15603381(+) m6A 5'UTR//exon//intron       24981863 chr17:15603399-15603400(+) m6A 5'UTR//exon//intron       24981863 chr17:15603413-15603414(+) m6A 5'UTR//exon//intron       24981863 chr17:15603464-15603465(+) m6A 5'UTR//exon//intron       24981863 chr17:15603474-15603475(+) m6A 5'UTR//exon//intron       24981863 chr17:15603493-15603494(+) m6A 5'UTR//intron       24981863 chr17:15603548-15603549(+) m6A 5'UTR//intron       24981863 chr17:15603623-15603624(+) m6A 5'UTR//exon//intron       - chr17:15603649-15603650(+) m6A CDS//exon//intron       - chr17:15609703-15609704(+) m6A CDS//exon       24981863 chr17:15609731-15609732(+) m6A CDS//exon       24981863 chr17:15609791-15609792(+) m6A CDS//exon       24981863 chr17:15609800-15609801(+) m6A CDS//exon       24981863 chr17:15611484-15611485(+) m6A CDS//exon       24284625//24981863 chr17:15611517-15611518(+) m6A CDS//exon       24284625//24981863//22608085 chr17:15611606-15611607(+) m6A intron       24284625//24981863//22608085 chr17:15614719-15614720(+) m6A intron       22608085 chr17:15619372-15619373(+) m6A CDS//intron       24981863//22608085 chr17:15619380-15619381(+) m6A CDS//intron       24284625//24981863//22608085 chr17:15619385-15619386(+) m6A CDS//intron       24284625//24981863//22608085 chr17:15619456-15619457(+) m6A CDS//intron       24284625//25456834//24981863//22608085 chr17:15619550-15619551(+) m6A CDS//intron       24284625//25456834//24981863//22608085 chr17:15619596-15619597(+) m6A CDS//intron       24284625//24981863//22608085 chr17:15619660-15619661(+) m6A CDS//intron       24981863//22608085 chr17:15619712-15619713(+) m6A CDS//intron       24284625//24981863//22608085 chr17:15619723-15619724(+) m6A CDS//intron       24284625//24981863//22608085 chr17:15619743-15619744(+) m6A CDS//intron       24284625//24981863//22608085 chr17:15619760-15619761(+) m6A CDS//intron       24284625//24981863//22608085 chr17:15619787-15619788(+) m6A CDS//intron       24284625//24981863//22608085 chr17:15619844-15619845(+) m6A CDS//intron       24284625//24981863//22608085 chr17:15619901-15619902(+) m6A CDS//intron       24284625//24981863//22608085 chr17:15619911-15619912(+) m6A CDS//intron       24284625//24981863//22608085 chr17:15619953-15619954(+) m6A CDS//intron       24284625//24981863//22608085 chr17:15620009-15620010(+) m6A CDS//intron       24284625//24981863//22608085 chr17:15620150-15620151(+) m6A CDS//intron       24981863//22608085 chr17:15620160-15620161(+) m6A CDS//intron       24981863//22608085 chr17:15620177-15620178(+) m6A CDS//intron       24981863//22608085 chr17:15620289-15620290(+) m6A CDS//intron       24284625//24981863//22608085 chr17:15620345-15620346(+) m6A CDS//intron       24284625//24981863//22608085 chr17:15620373-15620374(+) m6A CDS//intron       24284625//24981863//22608085 chr17:15620402-15620403(+) m6A CDS//intron       24284625//24981863//22608085 chr17:15620429-15620430(+) m6A CDS//intron       24284625//24981863//22608085 chr17:15620496-15620497(+) m6A CDS//intron       24284625//24981863//22608085 chr17:15620513-15620514(+) m6A CDS//intron       24284625//24981863//22608085 chr17:15620570-15620571(+) m6A CDS//intron       24981863//22608085 chr17:15622482-15622483(+) m6A intron       24981863 chr17:15622496-15622497(+) m6A intron       24981863 chr17:15622555-15622556(+) m6A intron       24981863 chr17:15622567-15622568(+) m6A intron       24981863 chr17:15622575-15622576(+) m6A intron       24981863 chr17:15622622-15622623(+) m6A intron       24981863 chr17:15623144-15623145(+) m6A intron       24981863 chr17:15623157-15623158(+) m6A intron       24981863 chr17:15623195-15623196(+) m6A intron       24981863 chr17:15623352-15623353(+) m6A intron       24981863 chr17:15623424-15623425(+) m6A intron       24981863 chr17:15638246-15638247(+) m6A 3'UTR//5'UTR//exon//intron       24981863 chr17:15647742-15647743(+) m6A 3'UTR//exon//intron       25456834 chr17:15647794-15647795(+) m6A 3'UTR//intron       25456834 chr17:15647799-15647800(+) m6A 3'UTR//intron       25456834 chr17:15647843-15647844(+) m6A 3'UTR//intron       25456834 chr17:15647942-15647943(+) m6A 3'UTR//intron       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TBC1D26	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H3-5p
Interactor2: TBC1D26

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg