Basic Information:

  VIRBase ID:  

VHID00141487

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H3-5p:  MIMAT0015279          NBPF11:  NR_169628     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H3-5p	NBPF11
miRBase Accession/Entrez ID	MIMAT0015279	200030
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	NBPF24

RNA Editing:

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	NBPF11	chr1:147574555(-) A-I exon 3'UTR    15342557 chr1:147574867(-) A-I exon 3'UTR    15342557 chr1:147574921(-) A-I exon 3'UTR    15342557 chr1:147574922(-) A-I exon 3'UTR    15342557 chr1:147575010(-) A-I exon 3'UTR    15342557 chr1:147575074(-) A-I exon 3'UTR    15342557 chr1:147575080(-) A-I exon 3'UTR    15342557 chr1:147575104(-) A-I exon 3'UTR    15342557 chr1:147575128(-) A-I exon 3'UTR    15342557 chr1:147575132(-) A-I exon 3'UTR    15342557 chr1:147575150(-) A-I exon 3'UTR    15342557

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NBPF11	chr1:146033479-146033480(-) Y 3'UTR//exon       26075521 chr1:146034032-146034033(-) Y 3'UTR//exon       26075521

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NBPF11	Chromatin K562 cells     - Exosome Blood     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H3-5p
Interactor2: NBPF11

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg